Oncorhynchus tshawytscha (Chinook salmon): 112221874
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Entry
112221874 CDS
T05605
Name
(RefSeq) vesicular inhibitory amino acid transporter
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112221874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112221874
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
112221874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
112221874
NCBI-ProteinID:
XP_024240044
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Position
LG02:11167595..11173059
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AA seq
535 aa
AA seq
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MAHLIRSKFQNKLSNAATSMSNKSTAKVSGMMARMGFQAATDEEGLGFAACDDLDYDHRQ
GLQMDIMKSDEMGGGDAGEGSGEGGIAGGEDGMATGDSHYQRDGTGPPLSGSKASGLGEE
EKSPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACL
YEEDEDGQLVRVRDTYVDIANACCQPRFPSLGGHIVNVAQIIELVMTCILYVVVSGNLMY
NSFPTLPISQKSWAIVATAALLPCAFLKNLKSVSKFSLLCTIAHFVINILVIAYCLSRAR
DWAWDKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQKPSEFHCMMNWTHIAACVL
KGLFALVAYLTWADATKEVITDNLPSTIRAVVNLFLVSKALLSYPLPFFAAVEVLEKSFF
NEQERTWFPNCYGGDGRLKAWGLTLRCSLVVFTLLMAIYVPHFALLMGLTGSMTGAGLCF
LLPSLFHLKLLWRKLLWHHVFFDVAIFVIGGICAISGFIHSMEGLIEAYKYGIED
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttaattcgaagcaagtttcaaaataaactgtcaaatgcggcaacttccatg
tcgaataaatccactgcgaaggtgagtgggatgatggccaggatgggcttccaggccgcc
acagacgaggagggactgggcttcgccgcatgcgatgatttggattacgaccaccggcaa
gggctgcagatggacatcatgaaatcggatgaaatgggtggtggagacgctggagaaggg
agtggagagggtggcattgctggaggagaagacggaatggcgactggggacagccactac
cagagagatggcaccggacccccgctctccggttctaaagcctcaggtctgggcgaagaa
gaaaaatcaccaaaaatcaccgcttgggaagcgggctggaacgtcaccaatgcaatccag
gggatgttcgttctgggtttaccatacgccattctccacgggggctacctcggactgttt
ctcattattttcgccgccgtggtatgttgctacacggggaaaatcctcatcgcctgcctg
tacgaggaggacgaagacggtcaactggtgcgtgtgagggacacatacgtggacatagcc
aacgcgtgttgtcagccgaggtttccatctttaggtggtcatatcgtgaatgtagcccag
atcattgagctggtaatgacgtgtatcctgtacgttgttgtgagcggtaacctgatgtac
aacagctttcccacgcttcctatctctcagaagtcctgggccatagtggccaccgccgcc
ctgctaccctgcgccttcctcaagaacctcaagtccgtctcaaaattcagcttgctgtgc
actatcgcgcacttcgtcatcaacatcctggtaattgcctactgcctctccagagcgcgt
gactgggcctgggacaaagtcaaattctacatcgatgtaaagaagtttccgatttctatt
ggaatcattgtgttcagttacacctctcagattttccttccgtcgctcgaggggaacatg
cagaagcccagcgagttccattgcatgatgaactggacccacatcgccgcgtgtgtcctc
aaaggcctgttcgccctcgtggcctacctgacttgggcggatgccaccaaggaggtcatc
acagacaacctgccctcaaccatcagggctgtcgtaaacctcttcttagtgtccaaagcc
ttactgtcatacccattaccattcttcgctgcagtcgaggttttggagaaatcctttttt
aatgaacaagaacgcacgtggttcccaaattgctacgggggcgatggacgcctgaaagcg
tggggcctcactctcagatgcagccttgtggtgttcacgttgctcatggccatttatgta
ccgcattttgcccttctcatgggtctaaccggcagcatgacgggcgcggggctgtgcttt
ctgctccccagcctcttccacctcaagctgctatggagaaagctgctatggcaccacgta
ttctttgatgtcgctatatttgtaataggaggcatatgcgctatctccggtttcatccac
tcaatggagggactcatagaagcttataaatatggcatagaagattag
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