Oncorhynchus tshawytscha (Chinook salmon): 112221907
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Entry
112221907 CDS
T05605
Name
(RefSeq) PDZ domain-containing protein 4-like
KO
K24056
PDZ domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112221907
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112221907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
112221907
NCBI-ProteinID:
XP_024240104
LinkDB
All DBs
Position
LG22:complement(15218648..15247267)
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AA seq
926 aa
AA seq
DB search
MGCNMCVVQKPEEQYRVMFQKGQISNTLCPFDGEGRLKVNGKELSCLSRDPTLDVRDPLL
SHVLKRGARRRAGLAGRLAGLDGTVAVPGGLTDCVDSGTQTDISFQHMLTLGRTAHHPGG
APPPHPPPSPPLPPILEPNLLNELLLEPEYYDPNDYFDITQHEADLRQDELEYEEVELYK
SRQQDKLGLTVCYRTDDEEDLGIYVGEVNPNSIAAMDGRIREGDRILQINGVDIQNREEA
VAILTQEDSTNISLLLARPEIENDNQLDPDELDLEVLDNAVHLPSPHQLRNRASMLGEGP
GVVGGGGVVVVRGRGHRDSPGLLHTLLSNSQELDSGVGRTDESTRNEESSEHDLLGDDQT
SAPTTNATNTPGSMRRFHSGQGDRDTPPLLHGHSTEFHFSTDSLLGLDCLGGGGGGDLAG
ERVYAADPVMMMMPGLTEEECERYRELLEIKCYYEKNSNALLLLGEHGGHGGQGGDGGVP
LDVNRNESLMQHEMALVEEELRHLEFKCRNILRAQKMQQLRERCLKAWPLEEESGAGAGW
VAPLVSEESCHHELSDINELPERERSDKDSTSAYNTGGESCRSTPLVSEQYPSPSAHGHS
SLEGGDSTSLPSRTPTRHRERGGRSERGQANLNQPYSPSSHRRGADVKTSSPRGAKFRSL
SRDGGARRGSDGGVRCPKTNGTVEGREGRSAENSPYLSRRHSGSRIPLRYQSCMQLRSPS
TSEGLERPRDGSESPMSLGSTCKDIPQGPVSMPSLPIPPPLPPPASPRMEWKVKVRSDGS
RYVAKRPVRDRLLKARAIKIREERSGMTTDDDAVSEMKMGRYWSKEERKQQLLRAREQRR
RREFMMQSRLDCLRERDRESSGGGQQGAPQGQEPTTILELSHRRSQKKRSRRILDNWITI
QELLAHGTRSPDGKKVYNPLLSVTTV
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaacatgtgtgtggttcagaagcctgaggaacagtacagggtcatgttccag
aagggtcaaataagtaacacgctgtgtccttttgatggagaaggtcgactgaaggtgaat
ggtaaggagctgtcctgtctctcacgggaccccaccctggatgtgcgagaccccctgctg
tctcacgtgttgaagaggggggcccggcggcgggcgggactggcagggcgactagcgggg
ctggacgggacagtagcagttccaggggggctgactgactgtgtggacagcggcactcag
actgacatcagcttccaacacatgttgactctgggaaggaccgcccaccacccaggtgga
gccccaccccctcacccgcccccctcccctccactgccacccatcctggaacccaacctg
ctcaacgagctccttttagagccggaatattatgaccccaatgactactttgatatcact
cagcatgaggcggatctcaggcaggatgagttggagtacgaggaggtggagctctataag
tctcgtcagcaggacaaactggggttaacggtgtgctaccggacagacgatgaggaggac
ctggggatctatgtgggcgaggtcaaccccaatagtatagctgctatggatggccgtatc
cgagagggggatagaatcttacagataaacggggtggacatccagaacagagaggaggcg
gtggccattctgacccaggaggacagcaccaacatctccctgctcctggcccggcctgaa
atagagaatgacaaccagctcgacccagatgaactggacctggaggttctggataacgct
gtccacctgcccagcccccatcagctgaggaacagggcctccatgctgggcgaaggacca
ggggtcgtgggtgggggtggtgtggtggtggtccgcgggcgaggtcaccgtgactctcca
ggcctgctccacacgttgctgagtaacagccaggagctggacagcggggtgggtcgtaca
gacgagagtacccgcaatgaggagtcctcagaacacgacctactaggagacgaccagacc
agtgcccccaccaccaacgccaccaacacccccggcagcatgcgcaggttccactctggc
cagggggacagggacaccccaccccttctacatggccactccacagagttccacttcagc
acggactctctactgggtctggactgtctgggtgggggaggaggtggtgacctggcaggg
gagagggtctacgcagctgacccagtgatgatgatgatgccaggtctgacagaagaagag
tgtgagaggtacagggagctattggagatcaagtgttattatgagaagaacagcaatgct
cttctgctgctgggggagcatgggggtcatgggggacaggggggcgatgggggggttcct
ctggatgtgaacaggaatgagagcctgatgcagcatgagatggccctcgtggaagaggag
ctacgccacctggagttcaagtgtcgtaacatcctgagggcccagaagatgcagcagctc
cgggagcgctgtctgaaggcatggcccctggaggaggagagtggggccggggctggatgg
gtggctcctttggttagcgaggagtcctgtcaccatgagctgtcagacattaatgagctc
cctgagagggaacgctccgacaaggacagcaccagcgcctacaacacaggaggggagagc
tgcaggagcacccctctggtcagcgaacagtacccctccccctctgcacatggccacagc
agcttggaggggggagactctacctctttgccgtcgcggacccccacccggcacagggag
aggggaggcaggagtgagagggggcaggctaacctgaaccagccctactcccctagctca
cacaggaggggagcggacgtcaagacctctagcccgagaggggccaagttcagatccttg
tcccgcgacgggggggcaaggagggggtcagacggaggggtgagatgccccaaaaccaat
gggacagtggaggggagggaagggcgtagcgctgagaacagtccttatctgtcccgccgc
cactctggctccagaatccccctgcgctaccagagctgcatgcagctgaggtccccctcc
acatccgagggcctggagagacccagggatggcagcgagagtcccatgagcctggggagc
acatgcaaggacatcccccagggccctgtgtccatgccatccttacccatcccccctccc
ctgcctccgccggcctcgccgcgtatggagtggaaggtcaaagtacgcagcgacggatct
cgctatgttgccaagcggcccgttagggaccgcctcctgaaggcccgggccattaagatc
cgggaggagcgcagcggcatgaccacggatgacgatgccgtcagcgagatgaagatgggc
cgctattggtccaaggaggaaaggaagcagcagcttctcagggcccgggaacagcgcaga
cgcagggagtttatgatgcagagcaggctggactgcctgagggagagggatagggagtct
agtggcggtggacaacagggggctccgcagggacaggagcccactaccatcttggagctg
agccacaggaggagccagaagaaacggagccgtaggatcctggacaactggatcaccatc
caggaactactggcccacggaaccaggtcccctgacggcaagaaggtctacaaccctctg
ctgtcagtcaccactgtctaa
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