Oncorhynchus tshawytscha (Chinook salmon): 112221935
Help
Entry
112221935 CDS
T05605
Name
(RefSeq) acidic mammalian chitinase isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00520
Amino sugar and nucleotide sugar metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112221935
Enzymes [BR:
otw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
112221935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
112221935
NCBI-ProteinID:
XP_024240158
LinkDB
All DBs
Position
LG22:complement(16295378..16299486)
Genome browser
AA seq
489 aa
AA seq
DB search
MNKCFISVSGLSVLMCLQMVSSTKLVCYFTNWSQYRPGTGKYLPANVDPNLCTHLIYAFS
MINHNNELVTYEWNDDVLYQSFNGLKKQNPALKTLLAVGGWNFGSSQFTIMVSTAANRQK
FIQSSISFLRMYGFDGLDLDWEYPGARGSPPEDKKRFTLLCRELLKAFEKEAADTSRPRL
LVTAAVAAGKGNIDNGYEIAEVAKYLDFINVMSYDMGGAWDPFTRHNSPLYRGASDAEEG
EHKYFNVDFAMKYWRDQGTPVEKLMMGFATYGRTFRTVSGDNGVGARTSGPASAGPYTRE
AGFWSYYEICTFLNGATVQLIEDQMVPFATKGNEWVGYDNRESFEIKARYLQDNKFGGAM
IWALDLDDFAGQFCGQGNYPLISHLRYLLASDLPPLPSTTRPPPLPSTTRPPPLPGTTTS
SVPATTSTPLPGSGFCGGKADGLYCNKEDLNAFYQCASGHTYLQKCAANLIFNEKCKCCD
WNLYNTSPA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatgtttcatttctgtttcaggactgtccgttttgatgtgtcttcaaatggtg
tcatcaaccaaactggtgtgctacttcaccaactggtcccagtacagaccaggcactggg
aaatatctgccggccaatgtggaccccaacctctgcactcatctgatctatgccttctca
atgatcaaccacaacaacgagctagtcacctacgagtggaacgatgatgttctctaccag
tccttcaatgggctgaagaagcaaaatcctgcactgaagaccctgttggcagttggtgga
tggaacttcgggtccagccagttcaccatcatggtgtcaacagctgccaatcgccagaag
ttcatccagtcatccatcagtttcctgagaatgtacggctttgatggcctggacctggac
tgggagtaccctggagcacgagggagccccccagaggacaagaaaaggtttacactgctg
tgcagggagttgctcaaagcatttgagaaggaagccgctgacaccagcagaccaaggctg
ctggtcacagctgcagtggctgctgggaagggaaacattgataacggttatgaaattgca
gaggttgcaaagtacttggacttcatcaatgtgatgtcctatgacatgggtggagcctgg
gacccattcacacgccacaacagtcccctttaccgcggtgcttcagatgcagaggaagga
gagcacaagtatttcaacgttgactttgccatgaagtactggagggaccagggcacccct
gttgagaagctgatgatgggtttcgccacctatgggcgcacattccgcactgtctctgga
gacaatggtgtcggagccagaacgagtggaccagcctctgctggaccctatacccgcgag
gccggcttctggtcctattatgagatctgtactttcctgaatggagcaactgttcagttg
attgaggatcagatggttccctttgccaccaaaggaaatgagtgggtgggatatgacaat
cgggaaagctttgaaataaaggcacgctatctacaagacaacaagtttggaggggccatg
atctgggctctggatctggatgactttgctggacaattctgtgggcagggcaactatccc
ctgatcagccatctgcgttatcttctggcctcagatttgccaccccttccttccacaaca
cgtccgccaccccttccttccacaacacgtccaccacccctgccaggaactaccaccagc
agtgtgcccgccaccacctccactcctctgcccggcagtggcttctgtggggggaaagct
gacggcctgtactgtaacaaggaagaccttaatgccttctaccagtgcgccagtggacat
acctacctccagaagtgcgccgctaaccttatcttcaatgagaaatgcaagtgctgtgac
tggaatttgtataacacgagcccggcatag
DBGET
integrated database retrieval system
