Oncorhynchus tshawytscha (Chinook salmon): 112221979
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Entry
112221979 CDS
T05605
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112221979
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112221979
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
DUF5076
pre-PUA_NIP7
SAE2
Motif
Other DBs
NCBI-GeneID:
112221979
NCBI-ProteinID:
XP_024240237
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Position
LG22:complement(18025356..18028704)
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AA seq
331 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSSLIVKVWHRELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFAKDFETVLVDACSHVAREADDGCRRPMDRLLTIWQERSLYKVE
FIQQLKLAIEDSNSPQHQPTEEKKAPKRTYQKIQELEEEEEDDDYRGHMSPQDSDISGPQ
LTEELVKALQDLENAASGDAAVRQKIASLPQEVQDVSLLEKITDKEAADKLSKTVDEACL
LLAEYNGRLAAELEDRRQLARMLTEYIGSQKEALTEREKKLEEYKQKLARVTQVRKDLKS
HIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattttctgagtctgcgttggagaagaagctttcagagctcagcaactctcag
cagagcgttcagacgctgtctctgtggatcattcatcatcgcaaacactcatcgctcatc
gtcaaagtatggcacagagaactgaagaaagcaaaaagcagcaggaagttgactttcctt
tatcttgccaatgatgtgattcaaaacagcaagaagaaaggtccagagttcgccaaagac
tttgagacagtccttgttgatgcttgctctcatgttgcaagagaggctgatgatggctgt
agaaggcccatggacaggctgctcactatctggcaggagcgcagcctctacaaggtagag
ttcatccagcagctgaagctcgccatcgaagactctaacagcccccaacaccaacccaca
gaagagaagaaggcccctaaacggacctatcagaaaatccaggagctggaagaagaggaa
gaagatgacgactacaggggccacatgtccccacaggattcagacatctcagggccacag
ctgacggaggagctggtcaaagccctgcaggacctggagaatgcggcctcgggtgatgct
gctgtgcgccagaagattgcctctctgccacaggaggtgcaggatgtgtccctgctagag
aagatcactgataaggaggcagctgataaactgtccaagacggtggatgaggcctgtcta
ctgctggctgagtataacggacgtctggctgctgagctggaggacaggaggcagctggcg
cgcatgctgacagagtatatcggtagccagaaggaagccctcaccgagagggagaagaaa
ctggaggagtacaaacagaagctggcacgggtcacacaggtgcgcaaggacctcaagtcc
cacatccagagcctgcctgacctctctctgctgcccaatgtgacgggaggtctggctcct
ctaccctctgctggagacctgttctccaccgactga
DBGET
integrated database retrieval system
