Oncorhynchus tshawytscha (Chinook salmon): 112222039
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Entry
112222039 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X6
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112222039
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112222039
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112222039
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
112222039
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112222039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
zf-RING_UBOX
DUF2828
Motif
Other DBs
NCBI-GeneID:
112222039
NCBI-ProteinID:
XP_024240353
LinkDB
All DBs
Position
LG22:21011962..21032308
Genome browser
AA seq
1309 aa
AA seq
DB search
MADNKGEEDMESSSKLDSEPQEEDSGDPELKDVNPLIAIETNLKEGEDSQSQENVSQMPK
PANDVVSGGGDASSNSAGTGEEGSISSNVSPVGNTNGGTTELKNVNAVIVIESNSKEGED
SQSQENISQVPTPANVSGGGDATSSNSAGAVGEGSTSSSPVGNTNGGTTESSAAGDTAGT
SPALTTDMSPPPTVPPANPVIPINLMDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPLP
ERQVTVQVPGPNGQPDTHIVNVMRCVVCCQDCKQSDIIDNYFVKDTTEASKTSDEKSAQM
CTSCEDNADTIGFCAECGEWLCKTCIEAHQRVKITKDHKIRKKEDVSEESVGVSEQRPVF
CPIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETHMVKLQEKKT
YVHYSHSQVTSRIKEVTDTHKKVEHDIKIAVFTLINEINKKGKYLLQQLESVTKERSMKL
LTQQTDIANLARQILHVLNFTHSAINSGSSTALLYSKRLIIYQLRKVLKAGLEPVPQANG
AVRFFCDPTFWAKNVVNLGNLVIEKMPQAQHPPNIMVGPISPGHGHPGHGKSPGQINLAQ
LRQQHMQQQAFAQQKQQQQHQQQQQQHQQQQQQQQQQQQQQQQQQQHQQQQQQQQHQQQQ
HQQQQQHQQRIQEQMRIASQMSQQHPRQAVPQMVQQQPPRLISMQAQQRGPMNGGPNMYP
PHHLRLPPGQGRMPSSSAQPRMPNGQQYSPMMQPQLQRQHSNPGHAGPFPVASLHNVSAA
NPTSPTSASMASAHAHRGPASPIVGAIDLIPSVTNPENLPCLPNIPPIQLEDAGSSSLDA
LLSRYILASTYPQLGLGPPGNMNLSHGPSTHSPGSSGLSNSHTPVRPSSTSSTGSRGSCG
SAGRPGPASGPMEQQVKVKQEPGAEKECGFSGTTSSNVKTEQGKDGGRSACMMSSSESRR
TPPLPVLGSVTSGSSVQDILKKVGEHVKTEPQDQEDCSGANRPGNAPITTSSTSTVASAA
LLTNGKGAAYAALRSPRTAQGTNQSGAGGKEDDPNEDWCAVCNNGGELLCCDRCPKVFHI
TCHIPTLKCSPSGEWMCTFCRSLASPEMEYQPDDEPRDEKDNSEQGLSPEDQRRCERLLL
YVFCHDLSEGFQEPVPPSIPNYYKIIKKPMDLTLVKQKLQLKHVQHYQSPKEFVSDVRLV
FSNCAKYNEMSRIIQVYDEEKQSNVQADSEVAEAGKAVSLYFEERLLELYPDESFPEVPE
EPEVPEVPEEPQAPAGEGEEADLTEDSEDEFVQPKRKRLKTDEKPMHIK
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaagaggatatggagagctcttccaaattagattcagaacct
caggaagaggatagcggagacccagaattgaaagatgtgaatccgctgattgccatagag
acaaatttgaaagaaggagaggattcacaatcccaggagaatgtttctcagatgcctaaa
cccgctaacgacgtcgttagcggaggaggggacgctagcagcaacagcgcgggcacaggg
gaagaaggcagcattagcagtaatgttagcccagttgggaacaccaatggtgggacaacc
gaattgaaaaatgtgaatgcggtgattgtcatagagtcgaactcgaaagaaggagaggat
tcacaatcccaggagaatatttcccaggtgcctacacccgctaacgttagcggaggaggg
gacgctactagcagcaacagcgcgggcgcagtgggagaaggcagcactagcagcagccca
gttgggaacaccaatggggggacaaccgagtcctcggctgctggggatactgctggaacc
tcaccagcactcacaaccgatatgtccccacctccaacagttccaccagccaaccccgtc
atcccaataaaccttatggatacttgcgctgtgtgtaaacaaagtctccagacccgtgac
tgtgaacctaaactcttaccgtgtcttcactcattttgcttgaaatgtatcccactgcca
gagcgacaagttaccgtacaggtgcctgggccgaacggacagccagacacccacatagtg
aatgtcatgcggtgtgtagtttgttgtcaagactgcaaacaaagtgacatcattgacaac
tactttgtcaaggacaccaccgaggcctctaagacttcagatgaaaaatctgcacagatg
tgcaccagttgtgaggacaatgcagataccattgggttctgtgcagaatgtggagagtgg
ttgtgcaaaacctgcatcgaggctcaccagagggtcaaaatcaccaaggaccacaaaatc
cgcaagaaagaggatgtctctgaagagtctgtaggtgtgtcggaacagaggcctgtgttc
tgtcccatccacaaacaggagcccctgaaactcttctgtgaaacctgtgacacactcacc
tgccgggactgccaactgctggagcataaggagcaccggtaccagtttctggaggaggcc
ttccagaaccagaaaggcatcattgagacgcacatggtcaaactgcaggagaaaaagacc
tatgttcactactctcactctcaggtgacaagcaggataaaggaagttactgatacccat
aagaaggttgaacatgacatcaagatagccgtgttcactcttatcaacgaaatcaacaag
aagggcaagtatttactgcaacagcttgagagtgtgactaaggagaggagcatgaagctg
ttgacccagcagacagacatcgccaacctggccaggcagatcctccatgtgctcaacttc
acccactctgccattaacagcggcagcagcaccgccctgctttacagcaagaggctgatc
atctaccagctgcgcaaggtcctgaaggctggactggaaccagtgcctcaggctaacgga
gctgttcgctttttctgtgaccccacattctgggccaagaacgtggtcaacctagggaac
ctggtgatcgagaagatgccccaggctcagcaccctcccaacattatggtggggcccatc
tccccgggccacggccacccaggccacggcaaaagccccgggcagatcaatctggcccag
ctcaggcagcagcacatgcagcagcaagccttcgcccagcagaaacagcagcagcagcac
caacaacaacaacagcagcaccaacaacaacaacagcaacaacaacaacaacaacagcag
cagcagcaacaacagcagcaccaacaacaacagcagcagcagcagcaccaacagcagcag
caccaacaacagcagcaacaccaacagaggatccaggaacagatgcgtattgcctcccaa
atgtcccagcagcaccccaggcaggctgtacctcagatggtacagcagcagcccccgcgc
ctcatcagtatgcaggcccagcagaggggccccatgaacggcgggcccaacatgtacccc
ccccaccacctgcgcttgcccccgggacagggccgcatgcccagctccagcgcccagcca
cgcatgcccaacggccagcagtactcccccatgatgcagccccaactgcagagacagcat
tcaaacccaggtcatgctggacccttcccagtggcatctctccacaacgtgagcgctgcc
aaccccaccagtcccaccagtgccagcatggccagcgcccatgcccaccgtggccccgcc
agccccatagtgggcgccatcgacctcatcccctccgtcaccaacccagagaacctgcca
tgcctaccaaacatcccccccattcagctggaagacgcgggctccagcagcctggatgcc
ctactgagtcgctacatcttagccagcacataccctcagctgggcctggggccccccggg
aacatgaacctctcccacggaccctccacacactcccctggctcctcaggcttatcaaac
tcccacacgcctgtgcggccatccagtacgtccagcacaggaagcaggggcagctgtgga
tctgcgggtaggccagggccagcaagcggcccaatggaacagcaggtcaaagtcaagcag
gagcccggagctgagaaggagtgtggtttctcgggaaccaccagctccaacgtcaaaacg
gaacaagggaaggatggagggaggagcgcgtgcatgatgagtagttcagagagcagacgt
actccccctctccccgtgttgggctctgtgacttctggttcctctgtccaggacatcctc
aagaaggtgggggagcatgtcaaaactgagccccaggaccaggaggactgcagtggggcc
aacaggcctggcaacgcccctatcaccaccagcagcacatccactgtggcctctgccgca
ctgctgaccaatggtaagggagctgcatacgctgccctgcgctctccacgcactgcacag
gggaccaaccagagcggggcaggagggaaggaggacgaccccaacgaagactggtgtgct
gtgtgcaacaacgggggagagctgctttgctgcgaccgctgccccaaagtcttccacatc
acctgtcacatccccaccttgaagtgctccccgagtggtgagtggatgtgcacgttctgc
cggagcctggcaagcccggagatggagtaccagcctgacgacgagcctcgtgacgagaag
gacaacagtgagcagggcctgagtcccgaggaccagaggaggtgtgagcgcctcctgctg
tatgttttctgccatgatctcagtgaggggttccaggagcctgtccctccctctatccct
aattactacaagatcatcaagaagcccatggacttgaccctggtgaaacagaagctacag
ttgaagcatgtccaacactaccagagcccgaaggagtttgtctcggatgtgcgcctggtc
ttcagcaactgtgccaagtacaatgagatgtctcgaataatccaggtatatgatgaggag
aaacagagtaatgtgcaggcggactccgaggtggcggaggcagggaaagctgtgagtttg
tactttgaggagaggctgctggagctctatccagatgagagtttccctgaggtaccagag
gagcccgaggtaccagaggttcccgaggagccccaggccccagctggagagggagaggag
gcggatctcacagaagactccgaggatgagtttgtgcagcctaaacgcaagcggttaaaa
acggatgaaaagccgatgcacatcaagtga
DBGET
integrated database retrieval system
