Oncorhynchus tshawytscha (Chinook salmon): 112222045
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Entry
112222045 CDS
T05605
Name
(RefSeq) biglycan-like
KO
K08118
biglycan
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112222045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112222045
Proteoglycans [BR:
otw00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
112222045
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
112222045
NCBI-ProteinID:
XP_024240374
UniProt:
A0A8C8HCS6
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All DBs
Position
LG22:complement(21176241..21182553)
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AA seq
372 aa
AA seq
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MLPFSVVLLLLCATPRPTASVALPFEQKGLLDFGKSIDVEGLMMMMMNDEEEGSAVEEYY
KPEQPTCPFGCQCNQNVVQCSDLGLHYVPYDIPPETRLLDLQSNQITEIREGDFKGLSNL
YALVLVNNKISRVHPRAFMPLKRMHKLYFSHNQLTAVPKNLPSSLVELRIHDNHIKRVAS
GAFSGLGSMNCIEMGRNPIQNSGFEPGAFDGLKLTFLRISEAKLTGIPKDLPEGLHELHL
DHNQIQAIELEDLRQYESLHRLGLGHNHIRHIEHGSLYYLQNLRELHLDNNRIPNVPGGL
AGMKYLQVVYLHSNNISQVDVNDFCPNGFGVKKTYYNGISLFDNPINYWEVVPATFRCVS
NRMAVQFGNHKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttctctgttgtccttctcctgctgtgtgccacccctcgtcccaccgcctct
gtggccctgccctttgagcagaagggcttattggactttgggaagagcatcgatgtagag
gggctgatgatgatgatgatgaacgatgaagaggaaggctcagcggttgaggaatactat
aaaccagaacagcctacgtgcccattcggctgtcagtgtaaccagaatgttgtgcagtgc
tctgacttgggtttacattatgtgccatatgacatccccccagagaccaggctcctggac
cttcaaagcaaccagatcactgaaataagagagggtgacttcaagggactcagtaacctc
tatgctttggtgttggtgaataacaagatctccagggtgcaccctcgggccttcatgccc
ctcaaaaggatgcacaagctctacttctcccacaaccagctgacggccgtgcccaagaac
ctgccctcttccctggtggagctgcgcatccacgacaaccatatcaagagggtggcatct
ggggctttctctggcctgggcagcatgaactgcattgagatggggaggaatcctattcag
aacagtggttttgagcccggagcctttgatggacttaaacttaccttccttcgcatttct
gaggcaaaactcacaggcatccctaaagatctccctgagggtctacatgagttgcatttg
gatcacaatcaaattcaagccattgaactagaagacctaagacaatatgagagtttgcac
aggttgggtctaggccacaatcacattcgtcacattgagcatggcagcctgtactacctg
caaaacctgagagagctgcatctagataacaaccggatccccaatgtccctggaggcctt
gctggaatgaagtacctgcaggtggtctaccttcactccaacaacatcagccaggttgac
gtgaatgatttctgccctaacggctttggtgtcaagaagacttactacaacgggatcagt
ctctttgataacccaatcaactactgggaggtggtgccggccaccttccgctgtgtcagc
aacaggatggctgtacagtttggcaaccacaaaaagtag
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integrated database retrieval system
