Oncorhynchus tshawytscha (Chinook salmon): 112222052
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Entry
112222052 CDS
T05605
Symbol
tbc1d25
Name
(RefSeq) TBC1 domain family member 25 isoform X1
KO
K24799
TBC1 domain family member 25
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222052 (tbc1d25)
Membrane trafficking [BR:
otw04131
]
Others
Rab GTPases of specific organelles
Auto phagosome
112222052 (tbc1d25)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112222052
NCBI-ProteinID:
XP_024240383
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All DBs
Position
LG22:complement(21247925..21256232)
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AA seq
893 aa
AA seq
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MATDEERGVVRVKVKKCEGILPVEFRSFAVDPQITSLEVLQHILIRAFELNGKRNFGISY
LSRDRGGLEVYLSLLSDWDLDAAFVSAAKPYLQLKMDIKPAEDSPVMEDWDIISPKEVIC
SDQLPGDRRSLAAAALPFTQSLLSQMMGRTLSRVQQALSWSYGEEVKPFKPPLSDAEFHS
YLNGQGQLSRPEELRLRIYHGGVEPSLRKICHFLCVQVVWRYLLNVYPDGLTGQERMDYM
KRKTREYDQLKGEWSARVSPEDLEFIRGNVLKDVLRTDRAHPYYAGSEDSPHLTALTDLL
TTFAITHPQVSYCQGMSDIASPILAVMDNEAHAFICFCGIMKRLEGNFRPDGQLMSVKFQ
HLKLLLQYSDPEFYCYLVSRGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDP
PETEVELFGPPLETDQTRMTSESGVEKRPAFTGEEEGEQKEKQRRRHMLRPSREEADGGR
KIDMEEGEREDRGARREGEGNFDMPYVGKEKVHNNAPVPPFEKQTSFGEFKYYNARNKDS
FDFMERDPPEGPVEMEASLHPVSSPLARQVTEDSEEDPGERAPLITDDDKSSSPETEERS
SPNGQTASPVSPFPHGLPSWKNGSSPSPGSTPSPSSWRGALPDTPSPKYTSPILPNGRVE
SPEKATRGFASFASVPNGTGANSPATPTGRSLVSSPLLTRSLLSSPILSFGRALPSLPVS
TVNKSFPSNLPSPCSRASSTAPNTPNSTKPENTTIKPCSLPPPQEFGKGNPFMLFLCLSI
LLEHRDHIIKNSFDYNELAMHFDRLVRRHNLGRVLQRAKALFADYLQSEVWDSEEGDEVS
SDSPTTVTAAFHSPPPSATRPLFTPLSSSPNSTYNLADTIPSPSSPVSLSPSS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgatgaggagaggggcgtagtgcgtgtcaaagtcaagaagtgtgaggggata
ctaccagtggagtttcgctcatttgctgtggatcctcagataacatcacttgaggtgcta
cagcacatcctcatccgagcctttgagttaaatggcaaacgcaactttggaataagttac
ctatcccgggaccgtggaggtttggaagtgtatctttcgctcctgtctgactgggattta
gatgctgcatttgtcagtgcagctaaaccttatctacaactcaagatggacattaagcct
gccgaagacagtcccgttatggaagactgggacataataagccccaaagaagtgatttgt
tctgaccagcttcccggggataggaggtccttggcggctgctgccctccccttcacccag
tccctactgtcccagatgatgggtcgaacactgtccagagtacaacaggccttgagctgg
tcttatggggaggaggtgaagcctttcaagcccccattgagcgatgcagagttccacagt
tacctcaacggccagggtcagctttcccgaccagaggaactgaggctacgcatctatcat
ggtggggtagagccttcactacgcaagatctgtcatttcctctgtgtccaggttgtgtgg
cgttacctcctgaacgtgtaccccgatgggctgaccggtcaggagaggatggactacatg
aagagaaagactagggagtacgaccagctgaagggggagtggtcagctagggtcagtcca
gaggacctggagttcatcaggggcaatgtactgaaggatgtcctgaggaccgaccgggcc
catccctattacgccggctccgaggacagcccccacctcaccgctctcaccgacctgctt
accacctttgccattacacatccacaggtgtcgtattgccaaggcatgagtgacatcgct
tctccgatacttgccgttatggacaatgaggcacatgcattcatctgtttctgtggcatc
atgaaacgcctagagggcaatttccgcccggatggccaactcatgtccgtcaagtttcag
catctgaagctgctactgcagtactcagaccccgagttctactgttacttggtgtcccgc
ggagctgatgacctgttcttctgttaccgctggctgctcttggaactcaaacgggagttt
gcctttgacgatgccctgaggatgctggaggtcacctggagctccctgcctcctgatcct
cccgaaacggaagtggagctttttgggcctcccctagagacagaccagaccagaatgaca
tctgagagtggtgttgaaaagaggcctgctttcacaggtgaagaagaaggggagcagaaa
gagaagcagcggagacgacacatgttgaggccttcaagagaggaggcagacggtgggaga
aagatcgacatggaggaaggagagcgggaggacagaggagccagaagagagggtgagggg
aactttgacatgccttacgtaggaaaggagaaggtgcacaataatgcgcctgttcctccc
tttgagaagcagaccagttttggtgagtttaaatactacaatgcacggaacaaggacagc
tttgatttcatggagagagacccaccagagggtcctgttgagatggaagcctccttgcac
cctgtatcaagtccactggcccggcaggtcaccgaggacagcgaggaggatccaggggag
agggcacctcttataacggatgatgacaagtcctccagcccagagacggaggagaggagc
tctcctaatggacaaacagcctctccggtctccccatttcctcatggtctgccaagctgg
aagaatggttcctctccgtctccaggctccactccctccccctcaagttggagaggtgcc
ctcccagacaccccgtcaccaaagtacacctcccccattttaccgaatggaagggttgag
tcgccagagaaagccacaagaggatttgcttcctttgcctcggtgccgaatggaaccgga
gctaactctcccgctacccccacagggaggtccttggtttcctctcccctactgactaga
tcattgctctcctcccctattttgtccttcgggagagctcttccttcgctgccggtcagc
acagtcaacaagtcctttcccagtaacctcccttctccttgcagcagagcctccagcact
gcgcccaacactccaaattcaaccaaaccagagaataccaccatcaaaccgtgttccctg
ccaccgcctcaagagtttggtaaagggaatcctttcatgttgttcctgtgcctgtcaatc
ctgttggagcatcgagaccacattataaagaacagctttgattacaacgagctggctatg
cactttgaccgccttgttcggcgacacaatctgggcagggtgctgcagcgcgccaaagcc
ttgtttgcggactacctgcagagtgaggtgtgggattcggaggaaggggatgaggtcagc
tcggactcgcccaccacagtcactgctgctttccactccccgcccccctctgccaccagg
cctctttttacccctttgtcatcctctccaaactccacctataacctggctgacaccata
ccttccccttcttcacctgtctccctctctccctcctcttga
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