Oncorhynchus tshawytscha (Chinook salmon): 112222055
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Entry
112222055 CDS
T05605
Name
(RefSeq) coiled-coil domain-containing protein 22 isoform X1
KO
K23343
coiled-coil domain-containing protein 22
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222055
04121 Ubiquitin system [BR:
otw04121
]
112222055
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Others
112222055
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Multi subunit type E3 associated proteins
112222055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC22_CC
CCDC22_N
Hemerythrin
LYRM2-like
Motif
Other DBs
NCBI-GeneID:
112222055
NCBI-ProteinID:
XP_024240386
LinkDB
All DBs
Position
LG22:complement(21329512..21339298)
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AA seq
638 aa
AA seq
DB search
MEEVDKILIHSLRQTGTDVGEDVQSVKRFSSELIVEAVVKCLRVIDPALGSSLSHSLPPG
MSARFRVGMSLAQACQDLGYKGEIGYQTFLYSNEPEIRSLLMFLVEKLPRESAEALDQPA
GKSVLLQKLIAAQIKAQLALPWLPPSCRLPLLCKTQNPGPSHSFHSQPLSLLHCLKVPGK
KPLKEEKDYHREFLPPVTAQPSQHASVPASLLELHAGELSAAQEWDNEWNSQGLLSRLTP
EEYRSRKRARLQKRIEEQLRTAAQSHSETLGAHRSGSALTELLQSFGGSSFGDILAKGTR
FTHTEKFTFTQEPAKASQQMAAAASSLPSLHQSEEELQARQQEELVSLQRQLQQLSLSLE
EVGGDMRQLTVSILQVSDELKQKELSKAEKEDSVRVKKQTIDLMPDAENNLAKLQALVEG
SAKRVVNLAAQWEKRRAPLIDEHRRLKELCSNQEIESSRKLSEIKELHNKIHQSAEESKK
KEALYKQLITEFENLPKDVSRSAYTARILEIVGNIRKQKEDITKILSDTKELQKEINNLT
GKLDRTFAVTDELVFKDAKKDESVRKSYKYLAALHENCTQLIQTIEDTGTIMREIRDLEE
QIETENGKKTVSNLEKILEDYKAIRQENSALAAKIREA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgataagattttaattcactcccttagacagaccggcacggacgtgggg
gaggatgttcagagtgtgaagcgcttctccagtgagctcatagtggaggcggtagtgaaa
tgtctgcgagtgatcgacccggccctggggagcagcctgtcccactccttaccccccggc
atgtctgcccgctttcgagtgggcatgagcctggcacaggcctgtcaggaccttggctac
aagggagagattggctaccagacctttctttacagcaatgagccagagatccgctccctg
ctcatgttcctggtggagaagctgcccagagaaagtgctgaggccttggaccaaccagca
ggtaaatcagtcctcctccagaaattgatagctgcccagatcaaagctcagctggccttg
ccttggctccctccatcttgcagactacccctcctatgtaaaacacagaacccaggaccg
tcccacagtttccactctcagccccttagtttactgcactgcctcaaagtgcctgggaaa
aagccattgaaagaggaaaaggactaccacagggaatttcttccacctgtgactgcacag
ccgtcgcagcatgcctcagtgccggcctccctgctggagctgcatgcaggggagcttagt
gccgcccaggagtgggacaatgagtggaacagccaaggcctcctttcccgcctcacccct
gaggaatatcgctccaggaagcgtgcccgtctgcagaagcggatcgaagagcagctgcgc
actgcggcccagtctcactcggaaaccctcggtgcccacaggtcgggctctgctctcaca
gagctacttcagtccttcgggggctcctcctttggtgacatcctcgccaagggcacccgc
ttcactcacactgagaaattcactttcacacaggagcctgcgaaagcctcccagcagatg
gcagcagcggccagctcccttcccagcttgcatcagtcggaggaggaactgcaggcccga
cagcaggaggagctggtctccctgcagcggcagctacagcagctctccctcagcctagag
gaggtgggcggagacatgaggcagctcaccgtatccatacttcaggtgtcggatgagctg
aagcagaaagagctgagcaaggcggagaaggaggactctgtgcgggtgaagaagcagacc
attgacctgatgccggatgcagagaacaacctggccaagctgcaggccctggtggaggga
agtgccaagcgagtggtcaaccttgctgcgcagtgggagaaacgcagagctccgctcatc
gatgagcaccgcaggctcaaggagctctgcagcaaccaagagattgagtcctccagaaag
ctatctgaaatcaaagagcttcacaacaaaatccatcagtctgcggaggagtccaagaag
aaggaggcactgtataaacaactgataacagagtttgagaatctccccaaagatgtctcc
cgctcagcatacactgcgaggatcctggagatcgttggcaatatcaggaaacagaaggaa
gacattacaaagattctgtctgacactaaggagctgcagaaagagattaacaatctgact
ggaaaactggaccgaacgttcgctgtgactgatgagctggtcttcaaggatgcgaagaaa
gacgaatctgtccgcaaatcctacaagtacctggcagccttgcatgagaactgcactcag
ttgatccaaactattgaggacacaggcacaatcatgagagagatcagagacctggaggag
cagattgaaactgaaaatggtaagaagactgtaagcaacctggagaagatcctcgaggac
tacaaagccattcgccaggagaactctgctctggctgccaagatcagagaggcctga
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