Oncorhynchus tshawytscha (Chinook salmon): 112222125
Help
Entry
112222125 CDS
T05605
Name
(RefSeq) cation channel sperm-associated protein subunit delta isoform X1
KO
K16895
cation channel sperm-associated protein subunit delta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112222125
04040 Ion channels [BR:
otw04040
]
112222125
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Sperm associated proteins
112222125
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
112222125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CATSPERD-E_C
Beta-prop_CATSPERD
Ig-like_CATSPERD
CATSPERB_C
Motif
Other DBs
NCBI-GeneID:
112222125
NCBI-ProteinID:
XP_024240520
UniProt:
A0A8C8JUU5
LinkDB
All DBs
Position
LG22:23905930..23922475
Genome browser
AA seq
767 aa
AA seq
DB search
MWRTHAQTIFIIIIIIMSFLPFCTNEEASPGFPWSSTPKQDVERQDQSIQAPSATFLYSA
KKRPVLVRSHCDNRLALYMGKWILITRALFEESATPLEYKGAGKLQGSVSSAAFVLDNLA
IVIDGKLYLYSLTKGTWTPAQGVKSMVSTVSALQCCFSKDKACMDVSSCVLLYNLGSVLD
DQQVYMSSNGGNSFFNLPMAPKATEFIIGVFNMPTVSSIVAMLADNQRKFSFRHISGNRS
VQTDNHPMRDPLSSIHVIQPAGMRGHLIIWSPHMLLYSPNHGIVIVPVYIMGEENATLPP
PKVTILQVATDDNGAMAVLTSDGVLYYGRAGLEATTVKFASVIDLSKDNLMLFSDYGDLM
MIQAREDLLLIGVDFDHKVIIVQQELTRTTPPVQSCPVEQFHSTFAGELFYIDMGSTVHL
SAVYIPSPLCKFFPLVTVTESKLLSLDEKCVEDGITTEGTKKYRLDIELKQLFFMEAADG
TLKPSSSLRKGSLSTVAVDLMGRNVSCKDFNPLKAHILIGCPPGKHTRVLKDITTCTKGT
FTQEQLQDNFSYVIPKAVYDPQHLFRPGSASSDLHISYSITDYFCPLLVYHDTPWIPSLE
LWNGNEFVEQVSADFVLFEVNGMYNYQYLQSVEEAKCVSQPQNWTSLLSQQKYQPNPNTA
WTRNNYKSCKDSDGPPLTDPEAQYQVLNMGTRNRVLFPNYNGMYVFRVIVVDPSYSYCML
TTTFSVYVYGAFPPHPLPSCVALGIFLAIFVVLLLIGFFLSKRNYKK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggacgcatgcccaaaccatttttataataataataataataatgtcctttttg
ccattttgtaccaatgaagaagccagtccaggttttccatggtcttccacacccaaacaa
gatgtcgaaaggcaggatcaatcgattcaagcgccatctgcgacattcctatattctgcg
aagaaacgaccagttctggttcgaagtcactgcgacaatcgcctggccttgtatatgggg
aagtggatcctcattaccagggcattatttgaggaatcagccactccactcgaatataaa
ggggctggtaagcttcaggggtcggtgagttcagcagcttttgtgttggacaaccttgca
attgtgatcgacggaaagttgtacttatactctctaactaaagggacatggactcctgct
caaggagtgaaatccatggtgtctactgtatctgcactacagtgctgcttcagcaaagac
aaggcctgcatggatgtgagctcttgtgttctgctgtacaatctggggagtgttcttgac
gaccaacaggtctacatgtcctcgaatggaggcaattccttttttaacctccctatggcc
cccaaggcaacggaatttatcataggggtattcaacatgcccactgtgtcaagcatcgtg
gctatgttagcagacaaccaaagaaagttttctttccggcacatttccggaaatcgttcg
gtacagacagacaatcaccccatgcgagacccactgtccagcatccatgtgatccagcca
gcaggcatgagaggccacctcatcatctggtccccacacatgctgctctactcacccaac
catggcattgtgattgtgccagtgtacattatgggagaagagaatgccaccctcccgcct
cctaaagtcaccattttacaggtggcaacagacgacaacggtgcgatggctgttctcacc
agcgacggggtactgtattatggcagggctggactggaggcaactacagtaaagtttgcg
tctgtcattgacctgtccaaggacaacctgatgctgttcagtgactatggggacctgatg
atgatccaagcccgtgaggacctgctgcttataggggtggactttgaccataaggttatc
attgtccagcaggagctaacacgtaccacaccacccgttcagtcctgcccagtggagcag
ttccacagcacgtttgcaggggagctcttctacatcgacatgggcagcaccgtccacctg
tctgctgtctacatcccatcacctctttgcaaattcttccccctggtgacagttacagag
tctaagcttctgtccttagatgagaagtgtgtagaggacggcattactacggagggcacc
aagaaataccgcctggacattgaactgaagcagttgttctttatggaggcagcagacgga
accctgaagccaagttccagtctacgtaaaggcagcctctccacagtggcagtagacctg
atgggaagaaacgtgtcctgcaaagacttcaaccccctgaaagctcacattctcattgga
tgccctcctggaaagcatacccgagttcttaaggacataaccacttgcactaaaggcacg
ttcactcaagagcagcttcaggacaacttctcttacgtcatccccaaagctgtgtatgac
cctcagcacctgttccggcctggctctgcctccagtgacctgcacatctcctacagcatc
acagactacttctgccccttactggtctatcacgacaccccctggataccctccctggag
ctctggaacggtaatgagtttgtggagcaggtgagcgctgactttgtgctgttcgaagtg
aacggcatgtataactaccagtacctccagtcggtcgaggaggccaagtgcgtctcccag
ccccagaactggacctctctgctgagccagcagaaatatcaacctaacccaaacactgcc
tggaccaggaataattataagagctgcaaggattctgatggtccgcccctcactgaccca
gaagcccagtatcaggtcctcaacatgggcacaagaaacagagtcttgtttcccaactac
aacgggatgtacgtgttcagagtcatagtggtggatcctagctacagctactgcatgctg
accactacgttcagtgtgtatgtgtatggggcgttccctcctcaccctctgccctcttgt
gtggcactgggcatcttcctggccatctttgtggtcctgctgctcatcggctttttctta
agcaagcggaattacaaaaaatag
DBGET
integrated database retrieval system
