Oncorhynchus tshawytscha (Chinook salmon): 112222128
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Entry
112222128 CDS
T05605
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112222128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112222128
03036 Chromosome and associated proteins [BR:
otw03036
]
112222128
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
112222128
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
112222128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
Motif
Other DBs
NCBI-GeneID:
112222128
NCBI-ProteinID:
XP_024240522
LinkDB
All DBs
Position
LG22:complement(23935122..23950828)
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AA seq
826 aa
AA seq
DB search
MSAKVELDVSAKEADPNPSSDALSSNDSLSKKTHPQTTALILPAPVPSTQKVEVSLGAAE
AGNGATAGEVETPTLAPQVGGACSIVHVLEWKEGMAILPSSNLKFCVSDCGTLEMISQEK
ISSAEPAVMVSGKIPDSKNRPTNKTDMVSPLSSVGGVAVEQERPIKIESKTQGGPGQQES
CDPMAQRTYPEQLRREPMTDKMGGGTDKIPGGRVASLDPELLKPMKKRKRKDYLSPSEEE
SELDGMDYLKTESRHNKAGAVEVHMDLWTWGQYLEETKAVAAPAKLFQESQRVPQCKSSF
RQGMKLEGIDPQHPSMYFVLTVAEVCGYRLRLHFDGYSDCHDFWVNANCPDIHPAGWCES
TGHKLYTPKDKSCKEEEFSWASYLKMSKAQVAPKEVFASPGRTDTECGFEVGMKLEAVDR
MNPSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDASSPYIHPIGWCQERSLPLTPPQDY
PDPGRFSWPRYLDETGSTAVSAEAFKVRPAHCFQAQMKLEVVDKRSPGLIRVATVEEVDT
HRIKIHFDGWSHMYDEWMDSDHPDTHPVGWCESTGHPLKIPPPESNKTQQLDPREPATTG
QSSFSSMPCKVINHSRSTKYSFHHRKCPTPGCDGSGHVTGRFTAHHCLSGCPLAERNQGR
LKTDLSDTEGSGAKRNILIFGQRTKKSRYHGRIGRPPKYRKSQHRGYQTIATEGMCPSLF
MSALSAHPDRTLSLCWEQHCKLLPGVQGIHATQVAAWTVEEVFGFVQKLTGCEEQACVFK
EEMIDGEAFLLLTQTDIVKILNIKLGPALKISNAILMFKSIDEGLK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaaagtggagctggatgtttcagccaaagaagcagatcccaatccttccagt
gatgccctctcctccaatgacagcctgtcgaagaagacacacccacagaccacagcactc
atcctgccagcccctgttcccagtacacagaaggtggaggtctctctgggtgctgctgag
gcaggtaatggagccactgctggagaggtggaaacccccactctagccccccaggttggg
ggagcctgtagcatcgtccatgtactggagtggaaagaagggatggccatcttacccagc
agcaacctaaagttctgtgtgagtgactgtggaacactggagatgatcagccaagaaaaa
atcagcagtgctgaaccagcagtaatggtgtctgggaaaatacctgactccaaaaacagg
ccaactaacaaaacagatatggtgtctcctctcagttctgtgggtggtgtggctgtggaa
caagagcggcccatcaagattgagtctaagacccagggagggccaggacaacaggagagc
tgtgatcctatggcacagagaacctacccagagcagctacgcagggagcctatgactgac
aagatggggggaggcacagataagattcccgggggcagggtagcatctctggaccctgag
ctgctgaaacccatgaagaagaggaagaggaaggactacctgagtccgtcagaggaagaa
tctgagctggatggaatggattacttgaagacagaaagcagacacaacaaagcaggtgct
gttgaagtccatatggatctgtggacatggggacagtatctggaggagaccaaagcagtg
gcagctccggccaaactctttcaagagtctcagagagtccctcagtgcaaaagcagcttc
cgccagggcatgaagttagagggcatcgacccccagcacccctccatgtactttgttctg
actgtggctgaggtttgtggctacaggctgcgtctccattttgacggctactcagactgt
catgacttctgggtaaatgccaactgccccgacatccacccggcgggatggtgtgagagc
actggacacaaactctacacccccaaagataagagctgcaaagaggaggagttctcctgg
gccagctacctgaaaatgagtaaagcacaagttgcccctaaagaggtgtttgccagccct
ggaagaacagatacggagtgtggttttgaggtgggcatgaagctggaggcggtcgaccgc
atgaacccctctctcatttgcgtggcgaccgtgaccgacgtggtggacgaccgcttcctg
gttcactttgataactgggacgacacgtatgactactggtgtgatgccagcagtccatac
atccatcctattggctggtgccaagagaggagcctccccctcacgccgcctcaagattac
ccagacccaggcaggttctcctggccaaggtacctcgacgagactggctctaccgccgtg
tctgctgaggcttttaaagtgcgtcctgcccattgcttccaggctcagatgaagctggag
gtggtggacaaaaggagccccggcctgatacgggtggccacagtggaggaggtcgacacc
caccgcattaagatccattttgatggctggagtcatatgtatgatgagtggatggactcg
gaccaccctgacacccacccggtcggctggtgcgagagtacgggtcacccgctaaaaatc
ccaccccctgagtccaacaaaacccaacagcttgaccccagggaacctgcaaccacaggc
cagtccagtttctcctccatgccttgcaaagtaatcaaccactccagatccacaaagtac
agcttccatcacaggaagtgtccaacgcctggatgtgatggctcgggtcatgtgactggg
cggttcacagcgcatcactgtctgtcaggctgcccattggctgagcgaaaccagggcaga
ctcaaaaccgacctatcagatacagaggggagcggagccaagcggaacatcttaatcttt
ggccaaaggaccaaaaagtcccggtaccatggcaggattggtcgtccccccaagtataga
aaaagccagcacagaggttaccagacgatagccacagagggtatgtgcccgtctctgttc
atgtctgccctttcggcccacccggaccgaaccctgtctctgtgctgggagcaacactgc
aaactgctgccaggtgtccagggcatccatgctacacaggtggcagcatggactgtggag
gaggtctttggatttgtccagaaattgactggttgtgaagaacaagcctgtgtcttcaaa
gaggaaatgattgacggggaggccttcctattactgacacaaactgacatcgtcaaaatc
ttgaacatcaaacttggtcccgccctcaagatctccaacgccattttaatgttcaagagt
attgacgaaggcctcaagtga
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