Oncorhynchus tshawytscha (Chinook salmon): 112222131
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Entry
112222131 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 6
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112222131
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112222131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112222131
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112222131
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
DbpA
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112222131
NCBI-ProteinID:
XP_024240532
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All DBs
Position
LG22:complement(23950951..23956957)
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AA seq
334 aa
AA seq
DB search
MPRIYVGKLNYNAREKDLQRFFNGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVTVEHARGPRRDRDGYGGGGGGGRSSSGYSSSRSRTGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFGSRSDMRRALDKLDGTDINGRKIR
LVEEKSRRRRSYSGSRSRSRSRRRSRSRSRRSSRSRSNSRSHSRSHSRSKRRHSKSGRKS
RSRSRTRKSRSRSNKSKSRSKSCSKVKSERDSRSRSKEKSANKKSRSRSASPVKNGKEER
SSRSPSPAADRRSKSPDKRSVSRSKSRSRSASRD
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcatctatgttggaaaacttaattataatgctcgagaaaaagaccttcaaaga
tttttcaatggctacggaaagcttatggaaattgatctgaaaaatggatatggctttgta
gaatttgaggataatcgcgatgcggacgacgcagtgtatgaactgaatggcaaggagttg
tgcggggagcgtgtgaccgtggaacatgccagaggaccgcgccgtgaccgagatggatat
ggtggtggcgggggtggtggtcgcagtagtagtggttacagcagcagcagaagccgcact
ggcagggataagtacgggccacccgtccgtactgagtaccgactgatcgttgagaatctg
tccagccgctgcagctggcaggatctgaaggatttcatgcgtcaggctggagaggtcacg
tatgccgacgcccacaaggagcgtaccaacgagggtgtcatcgagtttggctcacgctcg
gacatgaggagggccctagacaagctggacggcacggacatcaacgggaggaagatccgc
ctggtggaggaaaagtctcgccgccgacgctcctactctggcagtcgctctaggtctcgc
agcagacgtcgctctcgtagcaggagccgcaggagcagtcgctccaggagtaactccaga
tcccactcccgatcccattctcgaagcaagagacgccactccaagtctggaaggaagtct
cgttcccgctctcgcacccgcaaatccagatcccgttccaacaaaagcaagtcccgttcc
aagagctgctccaaggtgaaatccgagcgggattcccgcagccgctccaaggagaagtct
gccaacaagaagtcccgtagccgatcagcatctcccgtgaaaaatgggaaggaggagcgt
tcctctcgctccccttccccagcagctgaccgtcgctccaagtctccggacaagcgctca
gtctcccgctccaaatccaggtctagatcagcttcccgagattaa
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