KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112222132
Entry
112222132         CDS       T05605                                 
Name
(RefSeq) charged multivesicular body protein 4b
  KO
K12194  charged multivesicular body protein 4A/B
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
otw04144  Endocytosis
otw04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112222132
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112222132
  09143 Cell growth and death
   04217 Necroptosis
    112222132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112222132
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112222132
Membrane trafficking [BR:otw04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    112222132
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112222132
  Exosomal proteins of other body fluids (saliva and urine)
   112222132
  Exosomal proteins of colorectal cancer cells
   112222132
SSDB
Motif
Pfam: Snf7 SYF2 DUF6437 DUF155
Other DBs
NCBI-GeneID: 112222132
NCBI-ProteinID: XP_024240534
LinkDB
Position
LG22:complement(23975389..23978654)
AA seq 223 aa
MSVFGKLFGGGGKGGKGPSAQEAIQKLRETEEMLTKKQEFLEKKIDQELITAKKNGTKNK
RAALQALKRKKRYEKQLTQIDGTLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHEN
MDIDKVDDLMQDITEQQELAQEISDAISKPVGFGDEFDEDELLAELDELEQEELDKNLLE
IGGTENVPLPNVPSTSLPSRPAKKEDEDEHDMEDLQRWAMEAN
NT seq 672 nt   +upstreamnt  +downstreamnt
atgtccgtgtttggaaagctgttcggcggtgggggcaaaggaggtaaagggccaagtgca
caagaggcgattcagaagctccgagagacagaggaaatgttaacgaagaaacaggaattt
ctagagaaaaagattgaccaggaactcattactgcgaagaaaaacggaactaaaaacaaa
cgggcggccctgcaggccttgaaaaggaagaagcggtatgagaagcagcttacccagatt
gacggcacattgtccaccatcgagttccagagagaggcgttggaaaatgccaacaccaac
actgaagtgctcaagaacatgggctttgctgccaaggcaatgaaggctgcccatgaaaac
atggacatagacaaagtagatgacttgatgcaagacattactgagcagcaggagctagcg
caagaaatctcagatgccatctcgaaacctgtaggctttggagatgagtttgatgaggat
gaactcctagcagagttggatgagctggaacaagaggaattggacaaaaacttgctggag
attggcgggacagaaaatgtccctctacccaatgtgccttctacttcattaccctcaaga
cctgccaagaaggaggatgaagatgagcatgacatggaggacttacagcgctgggcgatg
gaggctaactag

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