Oncorhynchus tshawytscha (Chinook salmon): 112222181
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Entry
112222181 CDS
T05605
Name
(RefSeq) calcium-responsive transactivator isoform X2
KO
K15623
protein SSXT
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112222181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112222181
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112222181
GBAF(ncBAF) complex
112222181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Secretin
Motif
Other DBs
NCBI-GeneID:
112222181
NCBI-ProteinID:
XP_024240626
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Position
LG22:26183651..26207871
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AA seq
459 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQNKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMGSMGPGGMGQNGGSGPIHSQSNLNDAMTPGLPPPSMM
QSQMSNGPSHAPMQQQQHAGQTQSAGLSSTSLSLPASTHSSALGYSHPVPPSSQGSMIQG
PGPSPGYGSSSPSSSRSNLNMQSNPVSMMQQPHYPSSQTGAGQQHYQGQQTAMGMLGQSG
QGNSMVSQRPMGTYRHTQQGCALQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEYSY
QQSSYGEHGYERPFDESSQHYYEGGNSQYSQQQAQYQHGSGQQQPFSQQQYPSQQGYSTQ
QQGYGPGQGASSQYSQYQQGQGQQYSSYRSSQAAPGAQTQRPYAYEQVQLQLPLTPRFEE
DGAVQPNIGVNMETTSNKAPPPGQTGGQVRQGNTSVNAP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcattttcatcggcgcgcccaaggagcaaaggggaggtgacccaacaaact
atacaaaagatgctggatgaaaatcaccatctgatacaatgtataatggattaccagaac
aaaggaaaaacagcagaatgcacacagtatcagcagattcttcacagaaacctggtctat
ctggctacgatagcagattctaatcagaacatgcagtcactgttacctgcgcctcctacc
cctaacatggggagtatgggtcctggagggatggggcagaacgggggcagtgggcccata
cactcccagagtaacctcaacgacgccatgacacctggcctgccccccccctccatgatg
cagagtcagatgagcaatggccccagccacgctcccatgcagcagcagcagcatgcgggt
cagacacagtcggctgggctctcctccacgtccctcagcctgccggccagcacccacagc
tcagccttgggctacagccaccccgtgcccccctcttcccagggcagcatgatccagggg
cctggcccaagcccaggctacggttcttcctctccttcctcctcccgcagcaacctcaac
atgcagtccaacccagtctccatgatgcagcagcctcattacccgtcgtcccagactggg
gccgggcagcagcactaccagggccaacagactgctatgggcatgttggggcagagcgga
caaggcaacagtatggtgagccagaggcccatggggacttaccgacacacacagcaagga
tgtgcactgcagtacatgggacaagacgagttctacggagagcagtatggacacactcag
agctccagtgagcccataaaccagcagtattaccctgatggtcatggcgagtactcctac
caacagtcgtcctacggtgaacacggctatgagaggccctttgacgagtcctcacagcac
tactacgaaggaggcaactcccagtacagtcagcagcaagcccagtaccagcatggctca
ggtcagcagcagcccttcagccaacaacagtacccctcacagcagggctacagcacacag
caacagggctatggtccaggtcagggtgcgtcgtcccagtactcccagtaccagcagggt
cagggccagcagtatagctcctaccgttcctcccaggctgcccctggggcacagacacag
aggccctacgcttacgaacaggtacagctacagctacccctgaccccacgttttgaggag
gacggtgctgtccaaccaaacattggggtcaatatggaaactaccagcaataaggcacca
cctcctgggcaaactggtggacaggttaggcaagggaacacttctgtgaatgccccttaa
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