Oncorhynchus tshawytscha (Chinook salmon): 112222218
Help
Entry
112222218 CDS
T05605
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1-like isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112222218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222218
Membrane trafficking [BR:
otw04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112222218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
bZIP_2
PH_19
DivIC
Motif
Other DBs
NCBI-GeneID:
112222218
NCBI-ProteinID:
XP_042159927
LinkDB
All DBs
Position
LG22:complement(26774875..27009735)
Genome browser
AA seq
1230 aa
AA seq
DB search
MESPTETPTRAAEYLKELNNIIETQQELLERQKKRIEELEHQVSDLCSENACLKDLYQRH
LTTCRLLQQGNSHGTLGVIKENITQEKSECDSSKMVRRHASLPTDVTESPSSLMSAGCRR
SFPCRKWKSASFGVEGDVRPSESDGGASYRGPVISPDRFEGPLYGHGVQPGPQRPPRRPK
LQHSQSILRKQAEEEAIKRSRSHSEGYELSADLQDKQVEMLERKYGGRFITRHAARTIQT
AFRQYQMNKNFERLRSCMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSLTNDG
TPLALVQSECGDMEVHHQANMASHPASQNHLTDAITELEDAFSRQVKSLAESIDDALNCR
SLQGDEGHDPEALGCPEVEREVAYQVKPHRGATGRKREDMMASYSDVTLFIDEEELSPSM
GLSRGSGDQPSSIESDLRLRSANSSQDYWPLDPKDEEHDTDTSCRSTPSLECQEQRLHLP
LLTIEPPSDSSAEHSDRSDRSSIKRPPVYESHGGGHIVASSQASPKHISHGPPPRGPSRD
DEAPLRHRHRALESHLAINGSANRQSKSESDFSDGDNDSINSTSNSNDTINCSSESSSRD
SLREQTLSKQTYHKETRNSWDSPVFSNDVIRKRHYRIGLNLFNKKPEKGVQYLTERGFVP
DTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSSMELDEALRKFQN
HIRVQGEAQKVERLIEAYSQRYCICNPTVVRQFRNPDTIFILAFAIILLNTDMYSPNVKP
ERKMKLEDFVKNLRGVDDGEDIPRETLVGIYERIRKRELKTNEDHVSQVQKVEKLIVGNK
KPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKLQKLGLHQREIFLFNDLLVVTKIFQ
KKKNSVTYSFRQSFSLYGMQVLMFENQHYGNGIKLTSAIPGADIKVLINFNAPNPQDRKK
FTDDLRESIAEVQEMEKYRIESELEKQKGVVRPSMSQSSGLKKEAGNGNMNRASLDDTYT
MGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHTRRRATTPRSEGPPR
GHPTIPNSSSLLGSLFGSKRAKPSSQSHPPLPPPGHPTLISHTPHPSNLHHTAQQVAQAQ
LHHSQYCQQNPPPYHHHHHYHPPPHTQYHQHPAAYASSSTHSHQHPLVPQHSHSTHGHHA
SHSQHALHHHSQQQSPAHSKTKHSGISTVV
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcccgaccgaaaccccaaccagggctgcagagtatctgaaggagcttaataac
ataatcgagacccaacaggagttactggagaggcaaaaaaaaaggatagaggagctggag
catcaagtgtccgacttgtgttcagaaaacgcctgtttgaaagacctgtaccagcgacat
ctgactacgtgtaggctgctgcaacagggcaacagccacggaacgttaggtgtcataaag
gaaaacatcacccaagaaaaatctgaatgtgacagctccaaaatggtcaggagacatgcc
tctctgcccaccgacgtcacagagagcccttccagtctgatgtcggccggctgtaggaga
agtttcccctgccgcaagtggaagtccgcctcttttggtgtggagggggatgtgcggccc
agtgagagtgacggtggagccagctacaggggcccagtgatcagcccagaccgcttcgag
ggccccctctacggccacggagtgcagcccggcccccagcggcctccccgcaggcccaag
ctccagcactcccagtccatcctccgcaagcaggcagaggaagaggccatcaaacgctcc
cgctcacactcagagggctatgagctgtcggctgacctccaggacaaacaggtggagatg
ctggagcgtaaatatggcggacgcttcataacccggcatgcggcccgaaccatccaaaca
gccttccgtcagtaccagatgaacaaaaactttgaacgtctcaggagttgtatgtctgag
aaccgcatgtcccgacgcatcgtcctgtccaatatgaggatgcagttctccttcgagggc
cctgagaaagtccacagctcctactttgaggggaaacaagtgtccctgacaaatgacggc
acccccctggccttggtacagtcagagtgtggggacatggaggtccaccaccaggccaac
atggcatcacacccggcctcccagaaccacctaacggatgccatcacagagctggaggac
gccttctccaggcaggtcaagtctctggccgagtccatcgacgacgccttgaactgccga
agcctgcagggcgatgagggtcatgacccagaggccttgggctgccccgaggtggagagg
gaggtggcctatcaggtgaagcctcaccgcggggcgacgggacgcaagcgagaggacatg
atggcatcctacagcgatgtgactctgtttattgacgaggaggaactgtctccctccatg
gggctgtcgcgggggtctggtgaccagccctccagcattgagtcagacctccgcctgcgc
tcggccaactcctcccaggattactggccactggaccccaaggatgaggagcatgacacg
gacaccagctgccgcagcactccctccctggagtgccaggaacagaggctccacctcccc
ctgctgaccatcgagccgcccagcgacagctctgccgaacacagcgaccgctctgaccgc
agctccatcaaacgtccacctgtctacgagtctcacgggggagggcacatcgtggcatcc
tcccaggccagccccaaacacatctctcatggcccgcccccacgagggccctcccgggac
gacgaggcacccctccgccaccgccacagggcgctggagagccacctggccatcaacggc
tcggccaaccggcagagcaagtctgagtctgacttttcggatggggacaacgacagcatc
aacagcacgtctaactccaacgacaccatcaactgcagctctgagtcgtcgtcccgggac
agcctgagggaacagacactcagcaagcagacgtaccacaaagagacacgcaacagctgg
gactcaccggtcttcagcaacgatgtgatccgcaagaggcactatcgcataggcctgaac
ctcttcaacaagaagccagaaaagggtgtccagtacctgactgagagagggttcgtccca
gacacgcctgtgggtgtggctcacttcctgcttcagagaaagggcctgagcaggcagatg
attggagagtttctgggcaaccggcagaaacagttcaacagagacgtcctggactgtgtg
gtagatgagatggatttctcgtcgatggagctggatgaggcactgaggaagttccagaat
cacatccgggtccagggagaggcccagaaggtggagcgcctgattgaagcctacagtcag
cgctactgtatctgtaaccccacggtggtgcgccagttccggaaccctgacactatcttc
atcctggctttcgccatcatcctcctcaacacggatatgtacagccccaacgtcaagcca
gagaggaagatgaagctggaggacttcgttaagaatctcagaggggtggacgatggggag
gacatccccagggaaactctggtcggaatctatgagaggatcaggaagagggagctgaag
accaacgaggaccatgtgtctcaagtccagaaggtggagaaactcatagtgggcaacaaa
aaaccgattggatctctccaccacggtctaggatgtgtcctgtccctgccccatcgcagg
ctggtctgctactgccggctgtttgaagtgccggaccccaacaagctccagaagctgggc
ctgcaccagcgggagatcttcctgtttaatgatcttctggtggtgacaaagattttccag
aagaagaagaactctgtgacatacagcttcaggcagtctttctctctgtatgggatgcag
gttctgatgtttgagaaccagcattacgggaatggaatcaagcttacatcagccatacca
ggtgccgacatcaaagtgctcatcaactttaacgcgcccaacccccaggaccgcaagaag
tttactgacgacctgcgggagtccatcgccgaggtccaggaaatggagaaatacaggata
gagtctgagctggagaagcagaaaggggtggtgaggcccagtatgtcccagagctctggg
ctgaagaaggaggctggcaacggcaacatgaaccgtgccagtctggacgacacctacacc
atgggcgagggcctgaagaggagcgccctgagcagctccctccgtgacctctccgaagca
ggcaagcgtgggcgccgcagcagtgcaggatcactagacagcaatatggaagggtccatc
attagcagcccccacacacgccggagagccacaaccccccgaagtgagggcccgccccgg
ggccaccccaccatccccaactcctcctccctcctcgggtcgctcttcggcagcaagcgg
gcaaagccttcatcccagagccatccacctcttcctccgcccggtcaccccaccctcatc
tcccacacgccccatccgtccaacctccaccacacagcccagcaggtagcccaggcccag
ctccaccactcccagtactgccagcagaacccccctccctaccaccaccaccaccactac
caccccccgccccacacacagtaccaccagcacccggcagcatacgcatcctcctccacc
cactcacaccaacacccgcttgtaccacagcacagtcacagcacccacggccatcatgcc
tcccactcccagcatgcccttcatcaccacagtcagcagcagagtccggcacactccaaa
accaagcacagtggcatcagcaccgtggtgtga
DBGET
integrated database retrieval system
