Oncorhynchus tshawytscha (Chinook salmon): 112222226
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Entry
112222226 CDS
T05605
Symbol
fgd
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 3
KO
K05722
FYVE, RhoGEF and PH domain containing 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112222226 (fgd)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
SOS1_NGEF_PH
FYVE
PH_5
RHG20_PH
FYVE_2
Ribosomal_L32p
Motif
Other DBs
NCBI-GeneID:
112222226
NCBI-ProteinID:
XP_042159937
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All DBs
Position
LG22:27318590..27454322
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AA seq
923 aa
AA seq
DB search
MQGVSATTDLSPSSLQYQCGSVDFLCSPRLGKKAPPPPRPCHGRPAVKPHPQPTATPTSQ
KPQVPPKPLHLLALGQDKKPKRIPPAPSRPLPAPPTSPKTRPSQTPPGLATLPPREAQNV
GLLIERFEKSRIPILGVPPKNQLHLCLSMDAMSETTPPSAPDPTAHSPSGSAGAKDSGKR
SPADKLAHIVSERIDEVTELIELSRLASLRIDGHEDIPLDSMEDHLDIAHGDVGSLDDAE
REERGSSHELQDNPDSLSSEQNLNGKIPNRDSGIDSPSCAVEGEVFPNEDAIDEEERYDS
VTETETSVSCCITLDNKRDSTQDEDSDLDEVSSGEMEGGEKTDTHRCSETQRLLNIAREL
LHTEEAYVKRLNLLDQVFCTKLTEAGIPQEVITGIFSNISSIYCFHHKFLLPELKTRITG
EWDSNPRIGDILQKLAPFMKMYGEYVKNFDRAMDLVSTWSQRSSHFKSVVQNIQKQDVCG
NLTLQHHMLEPVQRIPRYELLLKDYLKKLPDDALDRKDTEKALELISTAANHSNAAIRKM
EKMNKLLEVYERLGGEEDIVNPANELIKEGHIKKMSAKNGTAQDRYLYLFNNMVLYCVPK
LRLMGQKFSVRERIDIAGMEIRKEVQENVKQNLPLTFAIIGKQRSLELQASTAEEKEDWI
QVILATIERHKQNSETFNKAFNSSFSREEDHTPDSPGPWSTTSIDSDSERLHERRSSKKK
EKEKQTCKGCNESFNFTKRKHHCKACGAAICGKCSKMLENKTCRLCPECFETCQVPEGPA
GAQGEMKRKATAEKQVSPSLLGDNCLQCGQLQVQEKGKSWTKTWVAVTKTEPLVLYLQTS
GQDSRGVRAIPLPGFEVNMAAPSAIEKSELKHAFRLSNSQQALLFSAQDAEVQDQWVELL
SRAARGETTTVTPVSLTEHRKSQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggtttcggcaacaactgacctctctccctcctctctacagtaccagtgtgga
tcggtggacttcctgtgttccccacggctgggaaagaaagccccgccccctcccagacca
tgtcacggccggcctgcagtcaagccccacccccagcctaccgccacacccacctctcag
aaacctcaagtgccgcctaagcccctgcacctgctggccctcggacaggacaagaagccc
aagaggatccccccggccccctccaggccactgcctgctcccccaacttcgcccaagacg
cggcccagccagaccccccctggcctggccacactgcctccaagagaagcccagaacgtg
gggctactcatcgagaggtttgagaagtccaggattccgattcttggcgtccccccgaag
aatcagctccacctgtgcctgagtatggacgccatgtctgagaccacaccaccctctgcc
cctgaccccacagcacactccccttcagggtcagcaggagcaaaggactctgggaaacgc
tcccccgccgacaaacttgcacatatcgtctcggagcggattgatgaggtcacagagctg
atagaactctcacgcctggcctcactccgcatcgacggccacgaggacattcctctggac
tcaatggaggaccacctcgacatcgcccatggtgatgttggttcccttgacgatgcggag
cgggaggagagaggctcttcccatgagctccaggacaatccggactctctctcctcggag
cagaacttaaatgggaagattcccaacagggacagcgggattgacagcccatcgtgtgcg
gtggagggtgaggtgttccccaacgaggacgccatcgacgaggaagagcgctatgacagc
gtcacggagacggagaccagtgtgtcctgctgcataaccctggacaacaagcgtgactcc
acacaggacgaggacagtgacctggatgaggtcagcagtggggagatggagggaggagag
aagacagacacacacaggtgctcagagacccagaggttactgaacatcgccagagagctc
cttcacactgaggaggcctacgtcaagagactcaacctcctggaccaggtattttgcact
aagctgacagaagctggaatccctcaggaggtgataacagggatcttctccaacatctcc
tccatctactgcttccaccacaagtttcttctccctgagctcaagacacgcatcactgga
gaatgggactcaaacccgcgtataggagatatcctccagaagctggctccctttatgaag
atgtacggagagtacgtgaagaactttgaccgtgctatggacctggtcagcacctggagc
caacggtcatcacatttcaagagtgtggtccagaatatacaaaagcaggatgtgtgtggg
aacctgactctccagcaccacatgttggagcctgttcagaggatccctcgctatgaactc
ctgctcaaggactatctgaagaaactgcctgacgatgcactggacaggaaagacacagag
aaggcattggagctcatatccacagcagccaaccactccaatgctgccatcaggaaaatg
gagaagatgaacaaactgctggaggtctatgagagactggggggagaggaggacattgtg
aacccagccaacgaactcatcaaggagggacacatcaagaagatgtctgccaagaatggg
acggcccaggaccgatacctctacctgtttaataacatggtgctgtactgcgttcccaag
ctgaggttgatgggtcagaagttcagtgtgagagagaggatcgacatcgcagggatggag
atcaggaaggaggttcaggagaatgtgaagcagaatctccctctcacgttcgccatcatc
ggcaagcagcgctcactagagctgcaggccagcacggcagaggaaaaggaagattggata
caggtgatcctggccaccatagagagacacaagcagaacagtgagacctttaacaaagcc
ttcaacagctccttctccagggaggaagaccacacgccagactcaccgggcccctggagc
accacatccatagactcagacagtgaaagactgcatgaaaggagaagttccaagaagaag
gagaaggagaagcagacatgtaaaggctgcaacgaaagcttcaacttcaccaagcgcaaa
caccactgcaaagcctgtggagcggccatctgtggtaaatgctctaagatgttggagaac
aagacgtgtcgactgtgtcctgaatgctttgagacgtgccaagtccctgaagggcctgca
ggggcccaaggagagatgaagaggaaagctacagccgagaagcaggtgtctccgtctcta
ttgggggacaactgtctgcagtgtggccagctgcaggtgcaagagaagggcaagagctgg
acaaagacctgggtggccgtcaccaagactgaacctctagtgctgtacctgcagaccagc
ggacaggactctcgtggggtacgggccatacccctcccggggtttgaggtgaacatggca
gcgccatcggcaatagagaagtcagagctcaaacacgcgttccggctgagtaactcccag
caggctctgctgttcagcgcccaggatgcagaagtccaggaccagtgggtggagcttctc
tctagagccgcccgcggggaaacaaccacagtcacgcccgtcagcctgacggagcacagg
aagagccaatag
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