Oncorhynchus tshawytscha (Chinook salmon): 112222244
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Entry
112222244 CDS
T05605
Name
(RefSeq) rabenosyn-5 isoform X1
KO
K12481
rabenosyn-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112222244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222244
Membrane trafficking [BR:
otw04131
]
Exocytosis
Others
Others
112222244
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112222244
Protein recycling
Rab4 associated proteins
112222244
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
112222244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rbsn
NPF
FYVE
zf-C2H2_9
zinc_ribbon_9
Trimer_CC
Motif
Other DBs
NCBI-GeneID:
112222244
NCBI-ProteinID:
XP_024240736
LinkDB
All DBs
Position
LG22:28074939..28091045
Genome browser
AA seq
786 aa
AA seq
DB search
MRQGQTVGVTATTLHPPINMASSYLPPFEGTGEVKEGFLCPLCLKDLQSFYQLQEHYEEE
HSGDDRHVRGQLKSLVQKAKKAKDKLLKRDGEDKPEMDSYESFYYGGVDPYMWEPQELGA
TRSHLDFFKKHRAARIDHYVIEVNKLIIRLEKLTSFDRMNIDAGKIRAIEKSVVSWVSDS
DVPFCPDCGNKFNLRNRRHHCRLCGSIMCKKCMEFVPLPLAYKLTSGTREALSVPGSPGQ
SQSPPTGGGGGSISGMGSRRGSVSSLSSVTSILEEKDDERIRCCCHCMDTLMRKQQKLEE
KDHVPDIVKLYERLRLCMDKVDERAPEYIRMAESLNAGETTYNLDTAGGLRMEVQKYYEL
IDALSKRILTLGMKEEPQPHPKNLQLQRMVRYTATLFVQEKLLGLMSLPTKDKYEELKMK
RKQEQEKRLAQERLAAQKRRQDSEKNRPASSTNGEPPQAPRVLRMTKAGGWLPSSDTLHT
HGELEDPMLQQIENIRSFLRQAKAAHRHDEVAILEENLRQLQDEYDQQQTHLAITLSQRL
AQEELQHLEDRERGKMKHRAQSQAPGSTQATYTWQGSLNLTDTGSLHREGEEELTPKAER
SPPSMRAFPALTDQDEESPPWLGGDVEGQNSASFNPFKEEDSTTVEEDPSNPFSEEIQKE
HKEVANGKKEYNPFEEEEEGGVQGQADGVTGNPFEEEEENDEGNPFKEASGNTPPGASTN
PFEEEGEAAMPDVDLIEEELLLQQIDNIRAYIFDAKLNGRLDEVELLSENLRELQRTLQE
QKLKTH
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagacagggacagactgtgggtgtcactgctaccaccctgcacccccccatcaacatg
gcctccagctacctgcccccctttgagggcacaggggaggtgaaggagggcttcctgtgc
ccgctttgcctgaaggacctgcagtcattctaccagctgcaggagcactatgaggaggaa
cactctggggatgacagacatgtcaggggacagctcaagagtctagtccagaaggctaag
aaagccaaagacaagctgctgaagagggatggagaggacaagccagagatggacagctat
gagtccttctactacggtggagtagacccctacatgtgggagcctcaggagctgggagcc
accagaagtcatctggacttcttcaagaagcacagagctgccaggatcgaccactacgtc
atcgaggtcaacaagctaattatcaggctggagaaactaacctcatttgacaggatgaac
atagatgcaggcaagattagagcgattgagaagtctgttgtgtcgtgggtgagtgactct
gatgtcccgttctgtcccgactgcgggaacaagttcaacctccggaacagacgacaccac
tgccgtctctgtggctccatcatgtgtaagaagtgcatggagtttgtgcccctgcctttg
gcttacaagctgaccagtgggacacgggaggccctgagtgttccaggcagcccgggccaa
tctcagtcccctccaacagggggtggtgggggcagcatcagcgggatgggctccaggaga
ggcagcgtcagcagcctgagcagtgtcacctccattctggaagagaaggatgacgagagg
atccgttgctgctgccactgcatggacaccctgatgaggaaacagcagaaactggaggag
aaggaccacgtgcctgacatcgtcaagctctacgagaggctgaggctgtgcatggacaag
gtggacgagagagctccagagtacatcagaatggctgagtctcttaatgctggagagacc
acctataacctggacacggctggtggactgagaatggaagtccagaaatactacgaactt
atcgatgcactgagtaagaggatcttaacactgggaatgaaggaggagccacagccccat
ccaaagaatctccagctgcagaggatggtcagatacacagccacactgttcgtccaggag
aagttactgggtctgatgtctctgcccactaaggacaagtatgaggagctgaagatgaag
cggaagcaggagcaggagaagaggcttgcccaggaaagactggctgcccagaagagaagg
caggactctgagaagaaccgcccagcctctagcaccaacggggagcctccccaggccccc
agagtcctccgcatgaccaaagctggaggctggctgccctcctcagacaccctccacacc
cacggggagctggaagaccccatgctgcagcagatagagaatatccggtcgttcctgcgg
caggccaaggccgcccatagacatgacgaggtggccattttggaggagaacctcaggcag
cttcaggatgagtacgaccagcagcagacccacctggccatcactctgtcccagagactg
gcccaggaggagctgcagcacctggaggacagggagagggggaagatgaagcacagggct
cagagccaagccccaggatccactcaggccacatacacctggcagggctcactgaaccta
actgatacagggagcctccatagggagggggaggaagagttgacccctaaagcagagagg
agccccccgtccatgagggccttccctgccctgacggaccaggatgaggagtcgcccccg
tggctggggggagatgtagagggacagaacagcgcctccttcaacccctttaaggaggaa
gactccaccacggtggaggaggatccgtccaacccgttctccgaggagatccagaaggag
cacaaggaggtagctaacgggaagaaggagtacaacccatttgaggaggaagaggagggc
ggggtgcaagggcaggctgatggcgtcacaggcaaccctttcgaagaggaggaggagaac
gatgaaggtaacccttttaaagaggcttctgggaataccccgccgggagcctcgaccaat
ccctttgaagaggagggtgaggcagcaatgccagacgttgacctgatcgaggaggagttg
ctgctgcagcagatcgataacattcgggcgtacatcttcgacgccaagctcaacgggagg
ctggatgaggtggagctgctgtcagagaacctgagagagctgcagcgcaccctgcaggaa
cagaagcttaagacacactga
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