Oncorhynchus tshawytscha (Chinook salmon): 112222247
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Entry
112222247 CDS
T05605
Symbol
wdr46
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112222247 (wdr46)
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112222247 (wdr46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
B-prop_COPA_B_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
112222247
NCBI-ProteinID:
XP_024240741
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Position
LG22:complement(28133981..28141102)
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AA seq
596 aa
AA seq
DB search
MAASSDTMLKKPHVGKKRKPPTRYWERTEEDGKNDGKKQKEGDNNEQTPQQNNTRTKKGG
KRGGKRGGAGKKVISGKSDPFPGSAPVPEEKLKKFRRGVKGELPPRPQYKLRDVVIRSEA
ASDLAQKQNARYDLMLPEDAGFLEGDEDEDTCTISQDDIVDAVDITAGAKYFNLTLSQFG
PYRLDYSKTGRHLLLGGRRGHVTCLDWQSKQLMCEMNVMETVNDVKWLHSEALFAVAQKK
WLYIYDNKGIELHCIRKFNDVLRMQFLPYHFLLATASATGFLQYLDVSVGKEVVAICTKA
GRLDVMAHNPHNAIIHLGHSNGTVTLWTPNQREPLVKMLCHQGGVRSVAVDKTGTYMVTS
GMDKKLKVYDIRAYRPLQSYFLPAGASCLSLSQRGLLSAATGDIVQVYRDVWGIPVTKPY
MAHRAKGSVWGVHFCPFEDVLGVGHGEGFTSMVVPGAGEPNFDGLDANPYRSAKQRQEWE
VKALLEKIQPELIGLDPSQLSQVDHSTWEQRHEDRVQVLGFDPLAKEKFTPRLKTKGRSS
SGKVEKRKKQVAHEDQRDVIRQTVEDRMKIDKERKEKEKKKAAAAGQKSALDRFRK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccagcgacacaatgttgaaaaaaccacacgtggggaaaaagagaaagcct
ccaacgagatactgggagcgcacagaggaagatgggaagaatgatggaaagaaacagaaa
gaaggggacaacaatgaacagactccgcaacaaaataacactaggacaaagaaaggagga
aagcgaggaggaaagcgaggaggagcaggaaaaaaagtcatatcagggaaatcagatcca
ttcccaggctcagcacctgtccctgaagagaagttgaaaaaattcaggaggggagtgaag
ggagaactgccccctcggccacagtacaagctcagagatgtggtcattcgatcagaggct
gcctcagaccttgcccagaagcagaatgcacgatatgaccttatgctcccagaggatgct
gggtttttggagggagacgaagatgaggacacatgcaccatctcacaggatgacatcgtt
gatgctgtggatattaccgcaggggcaaagtactttaacctgaccctgtctcagtttggg
ccttaccgactggattacagcaagactgggcgtcacctgctgcttggtggcaggagaggt
catgtgacctgcctggactggcagtccaaacagttgatgtgtgagatgaatgtgatggag
acagtcaatgatgtaaagtggctccacagtgaggctttgtttgcagtggctcagaagaag
tggctgtatatctatgacaacaagggcatcgagctccactgcatccgcaagttcaacgat
gttctccgcatgcagtttctcccctaccacttcctgctggctacagcaagtgcgacaggc
ttcctgcagtacttggacgtgtcagtgggtaaggaggtggtggccatctgcaccaaggct
ggccggctggatgtgatggcccataaccctcacaacgccatcatccacctgggccactcc
aacggcactgtcaccctctggacgccaaaccagagagagccacttgtcaagatgctctgc
caccaggggggtgtgcgctctgtcgccgttgacaagactggcacgtacatggtgacctct
ggcatggacaagaagctgaaggtgtatgacatcagagcctaccggcccctgcaatcctac
ttcctacctgcgggagcttcctgcctgtctctgagtcagaggggtctgctgtccgccgcc
acaggagacatagtccaggtgtacagagatgtgtggggcatcccagtgaccaagccctac
atggcccacagggcaaagggctcagtttggggtgtgcacttctgcccctttgaggacgtc
ctaggggtgggccatggagagggcttcactagcatggtcgtaccaggtgctggcgagccc
aactttgacggtctggatgccaacccgtaccgcagtgccaagcagaggcaggagtgggag
gtcaaagccctactagagaagatccagccagaactgattggcctggaccctagccagctc
agccaggtggaccactccacctgggaacagagacatgaggacagggtccaagtactgggc
tttgacccgctggccaaggagaagtttacaccaaggttaaagaccaaaggtcggagttca
agtggaaaagtggaaaagcgcaagaagcaagtggcacatgaggaccagagggatgtgatc
aggcaaacggtggaagacaggatgaagatagataaagagaggaaggagaaagagaagaaa
aaggcagcagcagctggtcagaagtctgctctggacagattcaggaagtaa
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