Oncorhynchus tshawytscha (Chinook salmon): 112222264
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Entry
112222264 CDS
T05605
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112222264
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
WW
Guanylate_kin
DUF6288
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
112222264
NCBI-ProteinID:
XP_042159965
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All DBs
Position
LG22:complement(28490254..28696756)
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AA seq
1649 aa
AA seq
DB search
MSKVIQKKNHWITKVTECAVSRDARGELNVELRGGAENGEFPYIGEVREDVLVYKNGQLS
EGELLLEVGGLSVSGLPLYDVLIAMNRCKGPVRLKTVRQGNKLNKDLKHYLSLRFQKSSP
DHELQQTIRANLYHHAMPCTTRPPRDGEVPGVDYNFLSVEDFLNLEQSGTLLEIGTFEGN
YYGTPKPPRQPVVGTVILSDAVLLNGPPGSQQSTPKRTKSYNDMQNAQVVPADYEDDDQA
TEMNNSFTGSLVRSLFPSPLLCTGNPSDQDESCGGVLRPYPARENAPSYGLNNVAASTSD
SGQQTHAQPQASPEDPLGPLPGNWEMAYTENGEVYFIDHNTKTTSWIDPRCLEKPLKPLE
ECEDDEEGVHTEEPDNELELPAGWEKIDDPVYGVYYVDHINRKTQYENPIVEAKRRMQLE
QQLPQPPEGERYIREWIEEHSSAGAPLAVYASNHLETYRDPQDPPPLPPPPGGTKRGKPF
FTRNPAELNGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDV
IVSVNDIIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPNTSLVTSVAILDK
EPIIVNGQQSYDSPSSHGSQTGGPVNGMRESRALSPSAEVASNGSHGYSSSDVVTLASSI
AGQPELITVHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKESDILMEVNKRNVQ
NMTHNQVVDLLSKCPRGSEVTMLVQRGVVPAKRSPKLVQQLERKDSQSSSQHSVCSHRST
HTDSPSHPSSNMPSEAVGPPPAAPTQLLPGLPPLPTQDPGDGTMTLQKKPDPFKIWAQSR
SMYESRQPDCQEQEIFLWRKDTGFGFRILGGNEAGEPIYIGHIVKYGAADEDGRLRSGDE
LICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKSSGYGVGKGEGDVPPSPASSHHS
STQAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPAALQPYDMEIQR
GENEGFGFVIVSSVSRPDAGTTLAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILSVN
GCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQTATES
RNNSKLKQAPPPPPPTQALPSQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAED
GAAVRNGKMRVGDEILEINSESTKNMKHARAIELIKNGGRRARLVLKRGDGSVPEYDASH
DGHSPTPGAQDSPQVRTLPPNSRYHTSSESSYPPDLHKPSRHEDAGQGRDRDRMEHSGRH
FNHHHHHTWNNNHTNSRQHSPDNSTSGGNNKKSLGRKFKKSDSESGISKLLKTLRKDSSG
KKAAAAEKERERSASSSTLDQRYGRSRRGSLDRSPTRKRNTSPDRRRAKSMDRRAERAHR
DCTPEREYDDGGFLSHAATPERPLYDRRLLREPQTPGRAYMEATTPERPNNGASSLSLSR
DRTTDMKASTPERPNNGASSLSRSRGRTLDRGSLKNGNLLRDSSAETRDESYGINGTPER
RYRSERDSSPNSSSSREELNYAAAPAPRLKDYYSTLKNNSSAHHNAGYNNAGLSNKAGQH
HNNAVGRAPNQFPEPKRRFYKESPKDLSI
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtaattcagaagaaaaaccactggatcaccaaagttaccgagtgcgctgtg
agtcgggatgctcgcggggagctgaatgtggagctgcgcggcggtgcggagaatggagag
tttccatacatcggggaagttagagaggatgttttggtttataaaaacggacaactgtct
gagggggagttactgctggaagttgggggtttgtcggtgtctggattgccactctatgac
gtcttgattgcgatgaatcgttgcaagggtcccgtcaggttgaaaactgtccgacaaggt
aacaagctgaacaaggacttgaagcactacctgagcctgaggtttcagaagtcctccccc
gaccatgagctccaacagaccatcagagctaacctctaccaccatgctatgccttgtacg
acacgcccccctcgagacggggaggtccccggggttgattacaacttcctgtctgtggag
gacttcttgaaccttgagcagagtggaacactactggaaataggaacgtttgaaggtaac
tattatgggacgcctaagccgccgaggcagcccgtggttgggacagtgattctcagtgat
gctgtgctcctcaacggccctccaggctcccagcagtccactcccaagcgcaccaagtcc
tacaatgacatgcaaaacgcccaagtagtacctgctgactacgaggatgacgaccaggcc
acagaaatgaacaacagttttacaggatccttagttcgtagtctcttcccctctcccttg
ttgtgcacaggtaaccctagcgaccaggacgagagctgcggtggtgttctgcggccgtac
cccgcgcgcgagaacgctccgtcctatggtctgaacaacgtggccgcatccacctcggac
agcgggcagcagacacacgcccagccccaggcctccccagaagaccccctaggacccctg
ccaggcaactgggagatggcctacaccgagaacggagaagtctacttcatagaccacaac
acaaagaccacatcgtggatcgaccctcgctgtctggagaaacctctaaaacctctggaa
gagtgtgaggatgatgaagaaggggtacatactgaggaaccggacaatgagctagagctg
cctgctggatgggagaagatagatgacccagtgtatggggtttactacgtagatcacatc
aacaggaagacccagtatgagaaccccatagtggaggctaaacgcaggatgcagctggag
cagcagctgccgcagcctcctgaaggtgagcggtacattcgagagtggatagaggaacac
tcctcagctggggctcccctggccgtctatgccagtaaccacctggagacataccgtgac
ccccaggacccgcccccactgccccctcccccgggagggaccaaacgagggaagccgttc
ttcacacggaacccagcagaactgaacggaaccttcatcaacaccaaactgaagaagagc
cgccgtgggttcggctttaccgtcgtcgggggcgacgagccggatgagttcctccagatc
aagagtcttgtcctggacggtcctgctgctgtggatgggaagatggagacaggtgatgtc
atagtgagtgtgaatgacatcatcgtgcttggctacacccacgcccaggtggtgaagatc
ttccagtccatcccgatcggctccatggtggacctggccctgtgccgcggctaccccctg
ccctttgaccccgacgaccccaacaccagcctggtgacctccgtggccatcctggacaag
gagcccatcatcgtcaatggccagcagagctatgactccccgtccagccacggcagccag
accggaggccccgttaacgggatgagggagtcgcgggccctcagcccctcggcggaggtg
gcgtccaacggctcacatggctactcttccagcgatgtggtcaccctggcgtcgtccatc
gccgggcagcccgagctgatcacggtgcacatggagaagggcgataagggctttgggttc
acaatcgctgacagcttgacgggtgggggtcagagggtgaagcagattgtggactacccc
cgctgcaggggcctgaaggagtcagacattctgatggaggtgaacaagaggaacgtccag
aacatgactcacaaccaggtggtggacctgctcagcaagtgtcccagaggcagcgaggtc
accatgctggtgcagagaggagtggtgccagccaagaggagccccaagctggtgcagcag
ctggagaggaaggacagtcagagcagctcccagcacagtgtgtgcagccatcgcagcacc
cacacagactctcccagccacccctcctccaacatgcccagtgaggccgtaggcccccct
ccggccgcccccactcagctgctgcctggcctgcctcccctgcccacccaggaccctgga
gatggtaccatgaccctccagaagaagccagaccccttcaagatctgggcccagtccagg
agcatgtatgagagcagacagccagattgccaggagcaggagatcttcctgtggcggaag
gatacaggttttgggttccgcatcctgggaggaaatgaggccggagagccgatctacatt
gggcacatagtgaagtatggagcagcagatgaggacgggcgtctgcgttcgggggacgag
ctcatctgtgtggacggcacggcggtggtgggcaagtctcaccagctggtggtgcagctg
atgcagcaggccgccaagcagggccacgtcaacctcactgtccgacgcaaaagctcagga
tacggagtgggtaaaggggagggtgatgtgcccccatccccggcctcgtcgcaccacagc
agcacccaggccccctccctgaccgagggcaagcgaaccccccagggcagccagaactcc
ctcaacacagtcagctccggcagtggctccaccagtgggatcggcagtgggggaggaggg
ggctctggcagtgctgtggtccccgcagccctgcaaccatatgacatggagatccaacgc
ggagaaaacgagggcttcggattcgtcattgtgtcgtcggtctccaggcctgatgctggg
actactttggctggaaatgcatgtgtggccatgccccacaaaatagggcgcatcatcgag
gggagccctgcggaccgctgtgggaagctgaaggtgggcgaccgtatcctgtccgtcaac
ggctgctccatcaccaacaagtcccactcggacatcgtcaacctgatcaaggaggccggg
aacaccgtctctctgaggatcattccgggtgacgagtcctccaacgcgtctctgttgacc
aatgctgagaagattgccaccatcaccaccacacacacaccccaaactgccacagagtct
cggaataactcaaagttgaaacaggctcctcctccacctcctccaacacaagctctgccc
tcacaggatgcagagttctactctgtggatctggagcgggacagtaaaggctttgggttc
agcctgagaggaggacgggagtacaacatggacctttatgtgttgaggctggctgaggac
ggggcggctgtcaggaatggcaagatgagggtgggagatgagatcctggagatcaacagc
gagagcacaaagaacatgaagcacgcacgcgccatcgagctgatcaagaatggtggccgg
agggcacgcctggtcctcaagaggggggatggatctgttcctgaatatgacgccagccac
gacgggcactctcccacacccggggcacaagactctccgcaagtgagaaccctgccacca
aacagccgatatcacacctcatcggagtccagttatccaccagaccttcacaaaccatca
cgccatgaggatgctggacagggccgagacagggacaggatggagcactcgggccggcac
tttaaccaccaccaccatcacacctggaacaacaaccacaccaactccagacaacactcc
ccggacaacagcaccagcggcgggaacaacaagaagagtcttggccgcaaattcaagaag
tctgactcggagagcggcatctcgaaactcttaaagactctgcgcaaggacagctctggg
aagaaggctgcagcggcggagaaagaacgagagcgctccgctagtagcagtactctggac
cagagatatggtcgatcgcgccgcggctccctcgaccgctcgcccacccgtaaacgcaac
acttcccctgaccgacggcgggccaagtccatggaccgcagggcagagcgagcacaccgg
gactgcacacctgagagggagtatgatgacggagggtttctcagtcatgcagccactcct
gaacgaccactctatgaccgtaggctcctgagggaaccacagaccccaggcagagcctac
atggaggccaccaccccagaacgccccaacaacggggcctcctccctgtctctctccagg
gaccgcacgactgacatgaaggcctccaccccagaacgccccaacaatggggcctcctcc
ctgtctcgctccaggggccgtacgctcgacagaggcagcctgaagaatggcaacctcctg
agggactcgtcagccgagacgagggatgagagctacgggataaacggaacaccagagaga
cgctacaggtcagagagagactcatctccaaacagcagctccagcagggaggagctgaac
tacgctgcagcgcctgctcccagactgaaggattactacagcacactgaagaacaactcc
tccgctcaccacaacgccggctacaacaatgcaggacttagcaacaaggcaggacaacac
cacaacaacgcagtaggccgtgccccgaaccagttcccagagcctaagagaaggttttac
aaagagagccccaaggacctcagcatctga
DBGET
integrated database retrieval system
