Oncorhynchus tshawytscha (Chinook salmon): 112222284
Help
Entry
112222284 CDS
T05605
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112222284
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112222284
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112222284
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: Other
Other
112222284
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
112222284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
LisH
ANAPC4_WD40
WAPL
Motif
Other DBs
NCBI-GeneID:
112222284
NCBI-ProteinID:
XP_024240801
LinkDB
All DBs
Position
LG22:29410112..29431779
Genome browser
AA seq
1570 aa
AA seq
DB search
MASASASVDSKAELTALLEHWLEKWEGEQQASTPDLVNILTKISELVERETEEYHKADPD
PFDDRHPGRADPECVLGHLLKILFKDDDFMNALVNSYVMTSRELTLNTAACRLLQNIMPG
LETAVVFQEKEGIVERLFKWAQEAEQPLMIYATGLLAGAMENQDIAANYREENSVLVPLM
LQRLRELQAKDTENRKEFKRPSPRKALGEPLLPLDEETVDGGFEDTPFSSGNNGTERVEK
GPEEDREENPFPPGNNRTEKGPEEDIEDSPFPSNESDNSSHKISSCTSSSIKGLMKPVSA
PQSLSHRDFPDGRAEGSSHLKRRAERENGRKVKQKLNFSLPEPERNFSELSNSSWSEMSP
WVIGNNYHLYPLTPEMEQRLILQYLTPLGEYQELLAVFMQMGACELLIHYMDLKQTNDVQ
LTFEALKYLASLLLHKKFAAQFVAHGGVQKLLEIPKPSMAATGVSLCLYYLAYNQDAMER
VCMLPHSILSDVVSYTLWLLECSHASGCCHATMFFSISFSYRAVLELFDRQDGLRRLVNL
ISTLEILNPEDQAALLSDDQIFSSRQTAKHTCMALRRFFEAHLAIKVEQVKQSLQRTEGG
APIHPQPYYKACSYTHEQVVEMMEFLIEYGPVRLYWEPAEVFHKLSCVQLLLQLISIACD
WRTYYGRSDTVRYALDILSILTVIPKTQLLMAESVAVPDGEGGNAVSTVGMSVVLLVAEG
EVFVNDAEIQKSALQVVINCVCAPDKRMSSIGKFISGTPRRRLPQTTKSSESVLSKMWNV
VQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRSSSVRQIISKLPLFSSGHIQQ
LMKEPVLQDKRSEHVKFCKFAAELIKRVSGKPLMIGTDVSLAWLQRANVVAQSRISFPEK
ELLLLIRNHLVAKGLHDTATTLTKEADLPMAILPHPSSSALLPVVVPPPPASPAPALPRT
PRLANGVAARLASHGSHPSMPLSVQPRPSTSQLLALPPAAPPLLTPHQSNGSPLIGRIVF
TRERPSPCPVPASCKKPRVLRQKSDYGAFSQSPAMKKQLDRHLPSPPALDSIITEYLREQ
HARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRNTRRVVYPKYGGVDGGCFDRHL
IFSRFRPMSVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHS
SAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVIGT
KEHIAHIYDIQTGQKTLTLNYPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSARAIHKF
DKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQA
DDDDDIMEMQTKTPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSV
NTDTVCRLYEVGRQRLAEEEEDEDDQEDDDQDDDDDDDDDSDDDMDTDPLIAELDNENGE
DEEDEEDGNNELSLSDDEVSRLLEGDGEEDDDDDDDDSDDDEEDGDLALDNTDSSDNSDL
EDDIILSLNE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggattccaaggcagagctgactgctctgctggagcat
tggttggagaagtgggagggggagcagcaggctagcacaccagacctggttaacatcctc
accaagatctcagagctggtggagagggagactgaggaatatcacaaagctgatcctgat
ccttttgatgacaggcaccctgggagagctgatccagaatgcgtcttgggtcatctgctt
aagatcctgttcaaagatgatgacttcatgaatgcgctggtgaatagctatgtgatgacc
agcagagagctcacccttaacacggcagcctgtcgcttgctgcagaacatcatgcctggg
ttggagaccgctgtggtctttcaggagaaggagggcatagtggagaggctgtttaaatgg
gcccaggaggctgagcaacccctgatgatctatgctacgggcctgctggctggagccatg
gagaaccaggacatcgctgccaactacagggaggagaactcggtcctggtgcctctaatg
ctgcagcggctacgtgagctgcaggccaaggacactgagaacaggaaggagtttaaacgg
cccagtcccaggaaggccctgggggaacctctccttcctctggatgaggagactgttgat
ggaggcttcgaggacaccccgttctcctctgggaataacggcacagagagggtggagaag
ggaccagaggaggacagagaggagaaccccttccccccagggaataacagaacagagaag
ggaccagaggaggacatagaggatagccccttccccagcaatgagtctgacaactcttcc
cacaagatcagcagctgcaccagctcgtccattaaaggcctgatgaaacctgtgtctgcc
ccgcagtctctgtcccaccgggacttcccagatggcagggcggagggcagcagtcacctc
aagaggagggcggagagggagaatggacggaaggtgaaacagaagctgaacttctccctg
ccggagccggagaggaacttcagcgagctgtccaacagcagctggtctgagatgagcccc
tgggtgattgggaacaactatcacctttaccctctgaccccggagatggagcagaggctc
atcctacagtacctcacccctctgggggagtaccaggagctgttggctgtcttcatgcag
atgggagcctgtgagctgctcatccattacatggacctgaagcagaccaacgatgtacag
ctcacctttgaggctctcaagtacctggcctccctgctcctgcataagaagtttgcagcc
cagtttgtggcccatggaggagttcagaagcttctggagatccctaagccttccatggcc
gccacaggggtgtctctgtgcctctactacctggcctacaaccaggatgccatggagagg
gtgtgtatgctgcctcactccatcctgtctgacgtggtgagctacactctgtggctgttg
gagtgttcccacgcctcgggctgctgccacgccaccatgttcttctccatttccttctcc
taccgagccgtgctggagctcttcgataggcaggacggcctccgacgcctcgtcaacctg
ataagtacgctggagatcttaaaccctgaagatcaggcggccctgctgagtgatgaccag
atcttctccagcaggcagacagccaagcacacctgcatggccctgcgcaggttcttcgag
gcccatctggccatcaaggtggagcaggtcaagcaatccctgcagcggactgaggggggc
gctcccattcaccctcagccctactacaaggcgtgcagctacacccatgagcaggtggtg
gagatgatggagttcctgatcgagtacggcccagtcagattgtactgggagccagctgag
gtgttccacaagctgtcctgtgttcagctgctgctgcagctcatctccattgcttgtgac
tggaggacctactatggcaggagtgacacagtgcgttatgccctggacatactgagcatc
ttgacggtgatcccgaagacccagctgctgatggctgagtctgtggctgtgccagatggg
gaggggggtaatgcagtctccaccgtgggtatgagtgtagtcctgttggtggcggaggga
gaggtgtttgtgaacgacgccgagatccagaagtctgctctgcaggtggtcatcaactgt
gtgtgtgctccggacaaacgcatgtccagcatcggcaagttcatctcgggcacacctcgt
agacgcctgccccagactaccaagagcagtgagagcgtgctcagcaagatgtggaacgtg
gtgcagtctaacaacggcatcaaggtgctcctgtccctgctgacggtgaagatgcccatc
acagatgcggatcaaatccgggccctggcctgtaaggccctggtgggtctgtcccgctcc
agctcagtcagacagattatcagcaagctgcctctcttcagcagcggacacatccagcag
cttatgaaggagcctgtgctccaagacaaacgcagcgaacacgtcaaattctgcaagttt
gcggcagagctcatcaagcgagtgtctggtaaacccctcatgatagggacggatgtgtcc
ctggcctggctgcagagggctaatgtggtggcccagtccaggatctccttccctgagaag
gagctactgctgttgatccggaaccacctggtggccaaaggcctgcatgacacggccacc
acactcaccaaggaggctgacctccccatggccatcctcccccacccatcttcctcagct
ttacttcctgtcgttgttccccctcctcctgcctcccctgcccctgccctcccccggacc
cctcggctggccaatggggttgcagcgcggttggcgagccacggctctcatccgtccatg
ccgttgtcagttcagccccgtccctcgacgtcgcaactcctcgcactccctccagccgcc
cctcccctgttgacccctcaccaaagcaacggctctcccctaattggtcggatcgtgttc
acgcgagagcgcccgtcgccatgccccgtgcctgccagctgtaagaagccgcgggtgctg
aggcagaagtcagattacggtgccttcagccagagtccagccatgaaaaaacagctggac
agacacctgccctctccccccgccctggacagcatcatcacagagtacctgagggagcag
cacgcacgctgcaagaaccctgtcaccacctgcccccctttctcccttttcaccccccac
cagtgccccgaacccaagcagaggcgccaggccccaaccaacttcacctcccgaaacaca
cgcagggtcgtctaccccaagtatggaggggtggacgggggctgcttcgacagacatctc
atctttagcaggtttcgtcccatgtctgtgttcagggaggcagatgaggatgagagtggg
ttcatgtgttgtgccttctctgcccgtgagcggttcctgatgctggggacgtgtacgggc
cagctcaaactctacaatgtgttcacaggccaggaggaggcgagctacagctgccacagc
tctgccatcacacacctagagccatcacgggatggctctctgttgttgacgtcggcatca
tggagttatcctctgtctgcactgtggggcatgaagtcagtgttcatcatgaagcattcc
ttcttagatgatcattatgtggagttcagcaaactctcacaagaccgagttattggcaca
aaggaacacatagcccacatctatgacatccagacggggcagaaaaccctgaccctcaac
tacccggacctggccaataactacaagaggaactgtgcgacctttaaccccactgacgac
ctggtgctgaacgacggtgtactgtgggacgtgcgctcggctcgtgccatccacaagttt
gacaagttcaacatgaacatcagtggagtgttccaccccaatggcctggaggtcatcgtc
aacactgagatttgggacctgcggacttttcacctcctccatacagtgccagctctggac
cagtgtaggatcgtcttcaacaacaacggcacggtgatctacggagcgatgctccaggca
gatgatgatgatgacattatggagatgcagacgaagactccctttggctcctccttcagg
acgttcaacgccaccgactacaaacccattgccaccattgacgtgaagaggaatatcttt
gacctctgcacagacaccaaggactgctacctggctgtgattgagaaccaggactcggtc
aacacagacacggtgtgcagactgtacgaggtgggacgccagagactggctgaagaggag
gaggatgaagatgatcaggaggatgacgatcaagacgatgacgacgatgatgatgatgac
tctgatgatgacatggacacggaccctctgatcgctgagctggataacgaaaacggggag
gatgaggaagacgaggaagacgggaacaatgaattatctctctccgacgatgaggtgtct
cgcctgctggagggggatggagaggaggatgatgatgatgatgatgacgactcggatgac
gatgaggaagatggggaccttgccctggataacacagacagctctgacaactctgacctt
gaggatgacatcatcctgtccctgaatgagtga
DBGET
integrated database retrieval system
