Oncorhynchus tshawytscha (Chinook salmon): 112222290
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Entry
112222290 CDS
T05605
Name
(RefSeq) poly(rC)-binding protein 3 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112222290
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
112222290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Y2_Tnp
Motif
Other DBs
NCBI-GeneID:
112222290
NCBI-ProteinID:
XP_024240817
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All DBs
Position
LG22:complement(29544845..29633295)
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AA seq
494 aa
AA seq
DB search
MRLPVCNSHITMNCEQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARV
NISEGSCPERIITITGSTDCVFRAFTMITYKLEEDLTTLVANGTISSKPPVTLRLVIPAS
QCGSLIGKGGAKIREIRESTGAQIQVAGDLLPNSTERGVTISGSQDSVIQCVKLICTVIL
ESPPKGATIPYRPSLSPGALLISGNQVFEASDFTPHPLYSVSQGGLDLQQSDLFQAYTVQ
NQYGIPHTELAKLHQLSMQQNMQQNMQQNMQQNMQQNMQQNMQQNMQQNMQQSTMCQQAT
TILSGMDSNSSQELLIPNDLIGSIIGRQGAKINEIRQMSGAQIKIGSQLDGTSDRHVTIT
GTPVSINLAQYLITSCLETAKSTAQAASMASPNMADLNMAFTQPVSPASSPHSASTLAAM
SALSPTPVMGHPYGVLPFSGLLGVKSVPFLTLSSPTPQVAVTAAPSHTTLAAYTTKISSA
NCIKKPDRQKFAPY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccctgtgtgcaactcccacatcactatgaactgtgagcaggacttcggagac
gggggcctgggtgtgacccttacactccgactgctcatgcacggcaaggaagttggcagc
atcataggcaagaaaggagagacggtgaaaagaatacgagaagagagcagtgcacgggtg
aacatctcagagggctcctgtccagagaggatcatcaccatcactggttctacagactgt
gtcttcagggccttcaccatgatcacatacaaactggaagaggacctcactacactggtg
gccaacggcaccatcagcagcaaacccccagtgaccctacgactagtcatcccagccagc
cagtgtggctcccttattggcaagggaggggccaagatcagggagatcagagagagcacc
ggagcacagatacaggtggcaggggatttgctgccaaactctactgagcgaggggtgacg
atatcggggagtcaggactctgtaatccagtgtgtcaagctcatctgcactgtaatcctg
gagtctcccccgaaaggtgctactattccttaccggcccagcctctccccaggagcactt
ctcatctctggcaaccaggtgtttgaggcatcagactttaccccccaccctctgtactca
gtctcccagggggggcttgacctgcagcagagtgatctcttccaggcctacactgtacaa
aaccaatatggaattcctcatacagagttggccaagctacatcagctatccatgcagcag
aacatgcagcagaacatgcagcagaacatgcagcagaacatgcagcagaacatgcagcag
aacatgcagcagaacatgcagcagaacatgcagcagagtaccatgtgccagcaggctaca
accattctatccggaatggactcaaactcatcgcaggagctccttattccaaatgatctg
ataggctcgatcatcggccggcagggcgctaagatcaatgagatcaggcagatgtcgggg
gctcagatcaagattggcagccagctagacgggaccagtgaccgtcacgtcaccattaca
ggcacaccagtcagcatcaacctggcacagtacctcatcacctcgtgtttagagacagct
aaatctacggcccaggcagcgtccatggcctcccccaacatggctgacctcaacatggcc
ttcacccagcccgtctccccggcctcctccccccactccgcctccaccctggcagccatg
agtgccctctccccaacccccgtcatgggccacccctacggcgttctgcccttttccggc
ctgctaggggtcaagtctgtccccttcctgactctttctagccccacgccccaggtcgct
gtcaccgcagccccctcccacaccaccctggcagcctacactaccaaaatctcctcagct
aactgcatcaagaaacccgacagacagaagttcgcaccttactga
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