Oncorhynchus tshawytscha (Chinook salmon): 112222328
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Entry
112222328 CDS
T05605
Symbol
parapinopsina
Name
(RefSeq) parapinopsin a
KO
K04251
long/medium wavelength-sensitive opsin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112222328 (parapinopsina)
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Vision
Opsin
112222328 (parapinopsina)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
7TM_GPCR_Srsx
7TM_GPCR_Srv
TMEM51
T4SS_CagC
Motif
Other DBs
NCBI-GeneID:
112222328
NCBI-ProteinID:
XP_024240879
UniProt:
A0A8C8C4M2
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Position
LG22:complement(33229518..33236642)
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AA seq
346 aa
AA seq
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MDHRQLLPNLHGNSSSSPGSVSEALLSRTGFTILAVIIGVFSVSGVCMNVLVIVVTMRHR
KLRQPLNYALVNLAVADLGCALFGGLPTMVTNAMGYFSMGRLGCVLEGFAVAFFGIAGLC
SVAVIAVDRYVVVCRPMGAVMFQTRHAVGGVVLSWVWSFLWNTPPLFGWGSFELEGVRTS
CSPNWYSREPGNMSYIILYFLLCFAIPFSIIMVSYARILFTLHQVSKLKVLEGNSTTRVE
IQVVRMVVVMVMAFLLSWLPYAAFALSVILDPSLHINPLIATVPMYLAKSSTVYNPIIYV
FMNRQFRDCAVPFLLCGLNPWASEQGGSEADTALSSVSKNPRVSPQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaccaccgacagcttctccccaatctccatggaaacagctcctcctccccgggctcg
gtcagtgaagcgctgctctccaggacgggcttcaccatcctggcggtgatcattggtgtg
ttctcggtgtccggagtctgtatgaacgtcctggtcatcgtggtgacgatgagacaccgg
aagctgcgccagcctctgaactacgccctagtcaacctggcagtggctgacctgggctgt
gctctgttcgggggactgcccactatggtcaccaacgctatgggctacttcagcatgggg
cggctaggctgcgtgctggagggtttcgctgtggctttctttggtattgcaggtctgtgt
tcagtggccgtgatagctgtggaccgttatgtggtggtgtgtcgaccaatgggggcggtc
atgttccagaccaggcacgcagtcggaggggtggtcctgtcctgggtgtggtcgttttta
tggaacaccccgcctctgtttggctggggcagctttgaactggagggggttaggacctcc
tgctccccaaactggtacagcagggaaccaggaaacatgtcttacatcatcctttacttc
ctgctctgctttgccattcctttctccatcatcatggtctcctacgctcgcatcctcttc
acactgcaccaggtgtccaagctgaaggtattggagggcaacagcaccacccgcgtggag
atacaggttgtgcgtatggtagtagtcatggtgatggccttcctgctcagttggttgccc
tacgcggccttcgccctctctgtgatccttgaccccagcctccacatcaaccctctcatt
gccacggtgcccatgtacctggccaagagcagcactgtctacaaccccatcatatacgtg
ttcatgaacagacagttccgggactgtgctgttcctttcttgctgtgtggtctgaacccc
tgggcctcagaacaagggggctctgaagctgataccgccctgtcctccgtcagcaagaac
ccacgagtctcaccccaatga
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