Oncorhynchus tshawytscha (Chinook salmon): 112222365
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Entry
112222365 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112222365
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112222365
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112222365
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112222365
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112222365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
112222365
NCBI-ProteinID:
XP_042160095
LinkDB
All DBs
Position
LG22:complement(37357831..37391381)
Genome browser
AA seq
1507 aa
AA seq
DB search
MASSSESGRRNGGQRSSDDSTSKKKQKDRANQESREAKRAAAGANAEHKKDVFVDWKQNA
NEVIARLRCGDGVQRVEDVTTTFTDTDCHARFPDGRQWDCHLHEEIEGSCSKVQYKEKSG
FLLLVMHKKIPFHSWPSLMQNKKEKQPVKVEAKNGKDQKQSPLVKPEKSVPETADMAELS
TQTSAPPAQCEQRRGKAERGVKRIMNYKPADRLESVVKAGGEGQTKPVSVSKGDLPQEPS
AKHPVHPPKVSKDPTSEMPRDTHTKSTANGKPHSPTGRDLQTSTAGDNRAELLGNGHEGT
TPEVAVSHTQQELKVQTEDKKAPESDFKAGAEEVIIPAATVSCAEISPKAGASTIKAERP
GEAERTDSETLVRQPPNEADQATEALTPTNRSGSGNPVTATDTKQAESSSSSSTQEEKRD
RSKEEHLEIKQEEAVPEPMVNLKLLKNDSYEKGTDLMVVNVYMKGIFRETARVIFREQDF
TLIFQTSDANFLRLHADCGANTVFKWQVKLRNLIQPEQSTYAFTPSRLDITLKKRHSQRW
GGLEAPATQGAVGGAKVAVPSAPSSQASQPGSSKHSLSAKEEPPWVGEGKPKPPRTVDGC
LDSVSSRTVSDHVPIKQEPAVTPKPTCMVQPMTHAPPAGSQHSQRSVEEEEEEEEKVCLP
GFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRAFENEINCKNPLGTGGRLAIGFAVLL
RALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTE
TVDSDGRLDEVGEIKVVADEAWQRHKMRNDSFIVDLFQGQYKSKLVCPVCSKVSITFDPF
LYLPVPLPQKQKVLTVFYFAKEPHKKPMKFLVSVSKENSSTAEVLESISRSVRIKAENLR
LAEVVKSRFHRIFLPSNSLDTLSSSDMLFCFEVLSKELAKERVVVLQVQQRPQVPSIPIS
KCAACLKPPLSDEEKLKRCTRCYRVGYCNQVCQKKHWSSHKVLCGPNIENVGLPFLVSVP
ESRLTYARLSQLLEGYSRYSVNVFQPPFQSGRTSPEVTQCLADLPPPAETPESVGPGDTA
RGGGAGDSEQEGSSLVPEAPLETAQASAHPAGDPDALSTHTTDSGFIEASSDSQGEKETS
CEKAVRPEGKAAVTGYQQPSESASSHTSQFYITVLHSNSKEQTLEEKEEAVLDLPEDSSL
ELVWKNNERLKEYVLVRSKELEFEEDPGSVNETARAGHFTLEQCLNLFTRPEVLAPEEAW
YCPKCQQHREASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCI
GQKDDMQQPPIYDLYAVINHYGGMIGGHYTAYARLPSAQNSQRSDVGWRLFDDSTVTMVE
ESQVVTRYAYVLFYRRRNSPVERPPRLLGAESPTSAGASASQASLIWQELEQEEEGVEEG
PRGLFRPRLGRRRAARREDGVEGQVWRLLRQRIPHYSDDDCVRYFVLGTLAAVLALLVNL
LYRANWG
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcagtgagtcaggtcggcgtaatgggggtcagcgcagttcagatgacagc
accagcaagaagaagcagaaggacagggccaaccaggagagcagggaggccaagcgagca
gcagcaggggccaatgcagagcacaagaaagatgtgtttgtggactggaagcagaatgct
aatgaggtgatcgcgaggctgcgctgtggagacggggtgcagagggtggaggacgtcacc
actaccttcaccgacacagactgtcatgcccgcttcccagatgggcgccagtgggactgt
catctgcatgaggagattgagggctcctgcagcaaagtacagtacaaagagaagagtggc
ttcctcctgctggttatgcacaagaagatccccttccactcctggccttcccttatgcaa
aataaaaaggagaagcagcctgtgaaagtggaggccaagaacggtaaagaccagaaacag
tcgcctctggtaaagcctgagaagtctgtcccagagacggcagacatggctgaactgtcc
acccagacgtctgctccaccggcacagtgtgaacagaggcgtggcaaagcagagcgaggt
gtcaaacgcatcatgaactacaaaccagccgacaggctagagtctgtggtgaaggctgga
ggagaggggcagaccaagccggtcagtgtcagtaaaggggacctgcctcaggagcccagt
gccaagcaccccgtccatccccccaaggtctccaaggaccccacctcagagatgcccagg
gatacacacaccaagtccacagccaatgggaaaccacacagccccactggccgggacctc
cagacatctacagctggtgacaatcgagctgagctgctaggcaatggccatgagggtaca
acacctgaggtagccgtcagccacacgcagcaggagttgaaagttcagacggaggacaag
aaggccccagagtctgatttcaaggctggtgcagaagaggtgatcataccggcagccact
gtgtcctgtgctgagataagccccaaggctggagcctccaccatcaaagcagagaggcca
ggggaggccgagaggactgattctgagacgctagtgagacagcctccgaatgaggctgac
caggccactgaggctctaacaccaaccaatcggtcaggatcagggaatcctgtgactgca
acagacaccaagcaggctgagtcctccagcagcagcagcactcaggaggagaagagggac
cggtctaaggaggaacatctggagataaagcaggaggaagcagttccagagccaatggtg
aacctgaagctgttgaagaacgactcgtacgagaaagggacagacctgatggtggtcaac
gtgtacatgaagggtatcttcagagagacagccagggtgatcttcagagaacaggacttc
acactcatcttccagaccagcgatgcaaatttcttgcgtcttcatgcggactgcggagcg
aacaccgtctttaagtggcaagtcaaactccggaacctcatccagcctgagcagtccacg
tatgccttcaccccatcccgtttagacatcaccctgaagaagaggcacagccaacgctgg
ggggggctggaggcccctgctacacaaggtgcagtgggtggcgccaaggttgctgtgccc
tccgcaccgtcctctcaggccagtcagccgggcagcagcaagcactccctctctgccaag
gaggagccaccctgggtgggggaggggaaacccaagccccctcggacagtggacggatgc
ctggacagtgtgtcatcccgcaccgtctcagaccatgtccccatcaaacaggagcctgca
gtcacgcccaagcccacctgtatggtccagcccatgacccacgcacctcctgccggcagc
cagcacagccagcgcagcgttgaggaggaagaggaggaggaggagaaggtgtgtctgcca
ggcttcacaggcctggtcaacctgggcaacacatgctttatgaacagtgtcatccagtct
ctttccaacacccgggaactcagggactactttcatgaccgggcgtttgagaatgagatc
aactgtaagaacccgttggggacgggtggtcggctagccatcgggttcgctgtgctgctc
cgggctttgtggaagggtacccaccatgcctttcagccctctaagttaaaggcgatcgtg
gcgagtaaggccagtcagtttacaggctatgcccagcacgatgcccaggagttcatggcc
ttcctcctggatggactccacgaggacctgaaccgcatccagaacaaaccctacacagag
accgtggactcagacggacggctggacgaggtgggtgaaataaaggtggtggcagatgag
gcgtggcagaggcacaagatgagaaacgactcgttcatcgtagacctcttccagggccag
tacaaatccaagctcgtctgcccagtgtgctccaaggtttccataacctttgaccccttc
ctctaccttcccgtgcccttgccccagaagcagaaggtcctcacagtgttctactttgct
aaagagcctcacaagaaacccatgaagttcctggtgagtgtgagtaaagagaactcgagc
acagccgaggtcctggagtccatctctcggagtgtgaggatcaaggcagagaacctgaga
ttggctgaggtagtgaagagtcgcttccatcgaatcttcctcccatccaactccctggac
acgctctcctcctcagacatgctcttctgcttcgaagtgctgtctaaggagctggccaag
gagagggtggtggtgctccaagtccagcagaggcctcaggtccccagtattcccatctcg
aagtgtgctgcctgcctgaagccgcctctctcggatgaagagaaactgaagcgatgcacc
cgctgctaccgcgtgggttactgcaaccaggtttgccagaaaaaacattggtccagccac
aaggttctgtgtgggcccaacatagagaacgtggggcttcccttcctggtcagcgtccct
gagtccagactcacctatgcccggctgtcccagctgctggaaggatactcaaggtattca
gttaacgtgttccagcctcccttccagtctggcaggacgtctccagaggtcacccagtgc
ctggctgaccttccccctccagcagagacccctgaaagtgtggggccaggggatacggcc
aggggcggtggggcaggggactcggagcaggagggctcctctctggttcctgaggctcca
ctagagacagcccaggcctcagcacatccagccggagacccagacgccctctccacccac
accacagactcaggtttcattgaggcgtcctctgactcccagggagagaaggagacctcc
tgtgagaaggctgtcagaccagaaggtaaagctgctgtgaccggctaccagcaaccatca
gagtctgcgtccagccacacctctcagttctacatcaccgtcctccactccaacagcaag
gagcagacactggaggaaaaggaagaggccgttctggacctccctgaggactccagcctg
gagctggtgtggaagaacaacgagcgtctcaaggagtacgtcctggttcggtccaaggag
ctggaatttgaagaggaccctgggtcggtcaacgagacagccagggctggacacttcacc
ctggagcagtgcctcaacctcttcactaggcctgaggtgctggcaccagaggaggcatgg
tactgtccaaagtgccagcagcacagagaggcctccaagcagctgctgctatggcgtctg
cccaacgtcctcatcatccagctcaaacgcttctccttccgcagtttcatctggagggac
aagatcaacgacatggtcgacttccccgtcaggaacctggacctcagtaagttctgtatt
ggtcagaaggacgacatgcagcagccacccatctatgacctctatgcagtcatcaatcac
tacgggggcatgatcggaggtcactacactgcctacgcacgcctgcccagcgcccagaac
agccagcgcagtgatgttggctggcgtctttttgatgacagtacggtgacgatggtggag
gagagccaggtggtgacacgctatgcctacgtgctgttctaccgccgccgcaactcccct
gtggaacgaccacctcgcttactgggggccgagtcccccacctctgcaggagctagcgcc
agccaggcatctctgatatggcaggaactggagcaggaagaggagggtgttgaagagggc
ccccggggcctgttccgtcccaggctggggaggagaagagcagccaggagggaggatggg
gtggaggggcaggtgtggcggctgctgcgccaaaggatcccgcattattccgatgacgac
tgtgtccgatattttgtgctgggtaccttggctgctgtactagcgttgttagtgaaccta
ctctacagagccaactggggctaa
DBGET
integrated database retrieval system
