Oncorhynchus tshawytscha (Chinook salmon): 112222413
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Entry
112222413 CDS
T05605
Name
(RefSeq) integrin alpha-X-like
KO
K05718
integrin alpha L
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04514
Cell adhesion molecule (CAM) interaction
otw04517
IgSF CAM signaling
otw04518
Integrin signaling
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112222413
04517 IgSF CAM signaling
112222413
04518 Integrin signaling
112222413
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112222413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112222413
04515 Cell adhesion molecules [BR:
otw04515
]
112222413
04090 CD molecules [BR:
otw04090
]
112222413
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112222413
Cell adhesion molecules [BR:
otw04515
]
Integrins
Integrin alpha subunits
112222413
CD molecules [BR:
otw04090
]
Proteins
112222413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Copine
vWA_Rv0959
Kelch_KLHDC2_KLHL20_DRC7
Motif
Other DBs
NCBI-GeneID:
112222413
NCBI-ProteinID:
XP_042158570
UniProt:
A0AAZ3PT07
LinkDB
All DBs
Position
LG02:64962369..64990054
Genome browser
AA seq
1140 aa
AA seq
DB search
MLVNKVKEKMSRQGPLSLLTWMGAMAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISG
KEKGVMVSAPYQKNGSGGICRCAQDRTDCTDCYTPQETDTIKYIGLSMAGQSTSPPTFTA
CSPGLAHECDGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSGSMTKDE
FDKNKGFIINIMTTLKNSSIKFAAVQFSSIARTVFNFNDYQEGRALTNLWKEKHMSNLTN
THQAIDFLLKNIFENQAAGATADATKVLVIITDGNPSDTDKRFNSINGSDDKNIIRFVIG
VKNVDLTKLKSLASKPKENNTFLIQDYDGLKGILDNLQKKIFNIEGSKTALAGNLTKEMS
QSGFSAVYVNKDTLVLGSVGSNNWRGSLFETEGQRSEEREIQDPTLDKDSYMGYSVAVGK
KNQNLLYFTGAPRSEHMGRILLFNKVNNNWTVAQRLSGEQMGSYFGAELCSVDIDSDGNT
DFLLVGAPMFHQPPREGRIYVYTLTDKLELRMERNVSVMAQGRFGSSISSLTDLNGDGLK
DVAVGAPLEDNHRGAVYIYLGEKLKGIRPEFSQRISAAMMRSKLQFFGQTIDGKMDLGED
GLTDIVVGTRGTVVVLRSRPVLSVSAHLHFHPSEISTDNFDCLAKETISPVVTLTACFNM
AEATKSKAVVLSAGMNVSYTLDVDPVRQRSRAFYNDTNKGARSLLSTVELRKERTCFNHS
VYMTQCVIDTLSPIIIQLKFSQSQSQQEGCTAILNTDSHTKAVVEVPFEKNCKENETCLA
ELEVDFNFITSTLLVVDQSYFNVTIRLSNHGDDSYNTSLTLLYPPGLSFSMMHLLKSTRR
TVFSCGGLEGEMDRTTCSVSIPVYRSKTTAVFTSKFHILNTYNWNDTMEMTVIGLSDNGN
STNSSLTRTIPVQFAVDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVQNLGFNSVPVT
VTFTFPTKLEHRFEMKDYEISVLQNHTQCGKVINSPTEYCSPEKYCKSIECESFLLEKFL
TVTFVLSGNVSFKDLDQHAKSLSLPKKFTGDRETVNFISFVELGYDKKRYAQTASDPGDN
STSFHQTQIDVQAEIIIHPQRELILGTGVGVGLFLLLIVTMAMYKMGCFQRKSPDYDERE
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgaacaaagtgaaggagaagatgtccaggcagggacccctctccctgctcacc
tggatgggagccatggctgtctcttcaatggctttcaacattgatgaagcaaacccaaaa
atctacaagggggaggaaaaggatttttttggatacaaagtcctgcaattcatatctggc
aaggagaaaggggtaatggtcagtgctccatatcagaagaacggatctggtggaatctgt
agatgtgctcaagacagaacagactgtacagactgttacactcctcaagaaactgacaca
atcaagtacattggactgtctatggctggacaatctacttctcctccaacattcactgcc
tgcagccctggtctggcacacgagtgtgatgggaactcctatctgaacagtatctgttat
cagttcaacagccagctccagatcacctcgaacttcacacctgccttccaagaatgtact
aagaaaatagtggacctcgttttcctatttgacggatcaggaagcatgacaaaggatgaa
tttgataagaacaaaggtttcataatcaatatcatgacaaccctaaaaaactcctcaatc
aagtttgcagcagttcagttctcatcaatagccaggacagttttcaacttcaatgactac
caagaggggagagccttgactaatctttggaaagaaaagcacatgtctaatctaaccaac
acacatcaggcgatagactttcttttgaaaaacatttttgaaaaccaagctgccggcgcc
accgcagatgcaactaaagtactggtcataataacagatggaaatcccagtgatactgat
aaaaggtttaactctatcaatggaagtgatgacaaaaacatcatccgtttcgttattggg
gtcaagaatgtcgatttgacgaaactaaagtcactagcatcaaagccaaaagagaacaac
actttcctcatccaggattacgacggactaaaaggaatcctagacaatttacaaaaaaag
atcttcaacattgaaggttccaagactgctctggctggaaacttgacgaaagagatgtct
cagagtgggttcagtgctgtctacgttaataaggataccttggttctgggctcagtgggg
tcaaacaactggcgtggatctctctttgagactgagggtcagagatcagaggaaagggaa
attcaggaccccacattggacaaagactcctatatgggatactctgtagctgttgggaag
aagaaccagaaccttctatattttaccggagcaccaagatctgaacacatgggacggatc
ctacttttcaacaaggttaacaacaactggactgtggcacaaagattgtctggagaacag
atgggctcctacttcggggcagagctgtgttctgtggacatagactcagacggcaacaca
gacttcctcctggtgggtgcaccaatgtttcaccaaccaccgagagagggcaggatctac
gtctacacactgactgataagctggaactgaggatggagaggaatgtttcagtgatggct
cagggtagattcggctcctccatctcctctctcacagacctgaatggagatgggctgaag
gatgtagctgtgggcgctccacttgaggacaatcacaggggggccgtgtacatctacctg
ggtgaaaagctaaaggggatccgccctgaattcagccagcgcatctcagctgcgatgatg
agatctaagctccagttctttggccagacgattgatgggaagatggacctgggtgaggat
ggactgactgacatcgtagtgggaacgcgtggcacagttgtcgtcttgagatcccgaccg
gtcctcagcgtctctgctcatctccacttccatccctcagagatcagcactgataacttt
gactgtctggcaaaagagaccatttcccctgtggtgactctgacagcctgctttaacatg
gcagaggcaacaaagagtaaagctgtggtgctgagtgcagggatgaacgtctcctacacg
ctggatgtggatccagtgagacagaggagccgagccttttacaatgacacgaacaaaggg
gccagaagtcttctctctactgtggagctgagaaaggagcggacctgcttcaaccactca
gtctacatgacacaatgcgtgattgacacattatcgcccataatcatccaacttaaattt
tctcaatctcaaagccaacaagagggttgtactgccattctgaatactgacagtcataca
aaggctgtggttgaggtgccctttgaaaagaactgcaaagaaaatgaaacctgtttggca
gagcttgaggtggacttcaacttcatcacatcaactttattagtggtggaccagagttac
tttaatgtgactataagactgtccaatcacggggatgactcctataacaccagtctaacc
ctcctctaccctcctggcctctcattctccatgatgcatcttctgaagtctacaaggaga
acggtgttcagctgtggtggtctggaaggtgaaatggacagaactacatgcagtgtcagc
atacctgtctaccgtagtaaaactaccgctgtgttcaccagtaaattccatattttgaat
acatacaactggaacgacacaatggagatgaccgtcatcggcctgagcgacaatggaaac
tcaaccaatagttccctaacccggaccatccctgttcaatttgcagttgacctggtagca
aaagcccttccccaagactccaccacttacatgaactttactctggaggacacatcacct
aaaagactggtgaatgtatatgaggtgcagaacttgggatttaactctgtaccagtcaca
gtcacattcactttcccaactaagcttgagcacagatttgaaatgaaggactatgaaata
tctgtcttacagaaccacactcaatgtggaaaggttatcaattcaccaacagagtactgc
tctccagaaaaatactgcaagtccatcgagtgtgaaagtttccttttggagaagtttttg
acagttacatttgtgctgtctggaaatgtttccttcaaggacctcgatcaacatgcaaag
agcttgtcattgccaaagaaattcactggggacagagaaacagtcaatttcatcagtttt
gtcgaactcggctatgacaaaaaacgatatgcccagacagcgagtgacccaggggacaac
tctacaagcttccaccaaacacagattgatgtccaggctgagatcatcattcatccacaa
agagagctgatactagggacaggagttggagtaggactctttctcctgctcatcgtcaca
atggccatgtataagatgggatgcttccagagaaaaagccctgattatgacgagagggaa
tag
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