Oncorhynchus tshawytscha (Chinook salmon): 112222449
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Entry
112222449 CDS
T05605
Name
(RefSeq) filamin-A-like isoform X1
KO
K04437
filamin-A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04510
Focal adhesion
otw04518
Integrin signaling
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112222449
09133 Signaling molecules and interaction
04518 Integrin signaling
112222449
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112222449
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112222449
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112222449
04147 Exosome [BR:
otw04147
]
112222449
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112222449
Intermediate filaments
Intermediate filament-binding proteins
112222449
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112222449
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
NOMO1-like_2nd
Invasin_D3
CFSR
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
112222449
NCBI-ProteinID:
XP_042160280
LinkDB
All DBs
Position
LG22:complement(45551871..45624937)
Genome browser
AA seq
2544 aa
AA seq
DB search
MSGSHLRQHQSAQPAFNALSPDKEADMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVN
KRIANLQTDLGDGLRLIGLLEVLSQKKMFRKYNQRPTFRQMQLENVSVALEFLDKENIKL
VSIDSKAIVDGNLKLILGMVWTLILHYSISMPMWDEEEEGGDGQQKTPKQRLLGWIQNKL
PEIPIHNFSRDWQSGRALGALVDSCAPGLCPDWDQWDQTKPVDNAREAMQQADDWLGIPQ
VITPEEIVDPNVDEHSVMTYLSQFPKSKLKPGAPLRPKLNPKKARAYGPGIEPVGNVVMK
KAMFTVETISAGMGEVLVYVEDPAGHKEEAKVTANNDKNRTYSVFYIPKVTGMHKVTVLF
AGLHINKSPYEVDVGMAQGDSSKATAQGPGLEPAGNIANKTTYFDVYTAGAGVGEVEVVI
MDPAGKKDVVVCQIEDKGNSSYRCTYKPTLEGAHTIYVTFAGGQISKSPFTVNIGEACNP
SLVRAKGRGLQPKGLRVKETADFRVFTKGAGTGELKVTIKGPKGLEEPCKRKDLGDGVFG
FEYYPTTPGTYSITITWGGQHIPRSPLEVKIGLEAGPQKVRAWGPGLESGIVGKSADFVV
EAVGENVGTLGFSVEGPSQAKIECDDKGDGSCDVRYWPMEAGEYAVHVLCNNEDIQHSPF
MAEITAALNKDYYPDKVKAYGPGLQSSGLAVGKPTEFTVDAKLGGNAALNILAQDGEGTP
VDVQVKDNGNGTYTCSYTPKKPLKHTVMASWGGVNIPDSPFRMTIGAGCHPNKVKVSGPG
VAKTGLKAFEPTFFTVDCAEAGQGDISIGIKCSPGVVGPAEADIDFDIIRNDNDTFTVKY
TPPGAGSYTIMVLFADQTIPMTPIRIKVDPSHDASKVKAEGPGLNRSGVELTKPTHFTVN
TKAAGKAKLDAVFSGPAKGEAVKDFEIINNHDNTHTVKYTPIQQGPLGVAVTYGGDSIPK
SPFSIPVAPSLDLSKIQVDGLGDKITVGKDQEVTVKSKGAGGQGKVGAKVTGPSGKPVTC
KVEPGLKPETSQVKFIPREAGPYQVELTYDSAPIPGSPFKPTAYPPTDATKVKCSGPGLE
RAKVGETGEFVVDCTNAGPAELTIEIISDSGTEAEVHIQDNGDGTYTITYIPLYPGSYTL
TIRYGGQDVPNFPARLTVEPAVDASGIRVFGPGVEGKGVFREATTDFTVDARALNQTGGN
HIKTVIQNPSGSVTDAVITDRRDGTYNVEYTPYEEGPHSVKVAYDESPVPKSPFRVAVTE
GCDPGRVRAHGPGLDSGITNKANKFTVETRGAGTGGLGLAVEGPSEAKMSCTDNKDGSCS
VEYIPYEAGTYNLNITYGGQPIAGSPFQVPVSDTVDSSKVKCQGVGLGTNVRANIPQAFT
VDASKAGVAPLQVRVQGPKGVVEPAELVDNGDQTHTVNYIPTREGPYSINVLYADQEIPR
SPYKVKVLPTHDASKVRASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPK
KASIRDNQDGTYLVSYVPDMTGRYTILIKYGGDEIPYSPYRIRALPTGDASKCTVTVSIG
GHGLGAGVGPTIQIGEQTVITVDAKAAGKGKVTCSVCTPEGVELDVDVVENEDGTFDIFY
TAPQPGDYCICVRFGGELIPNSPFLVTALEGAPSDQLLQQQQLPQYYSQQPWATDRPMGM
NGLDVAGLRPFDLVIPFTIQKGEITGDVRMPSGKTAKPDITDNKDGTVTVKYAPTEAGLH
EMDIKYDGIHIPGSPLQFYVDYVNSGNVSAYGPGLIHGTVNKPAMFTVNTKDAGEGGLSL
AIEGPSKADISCVDNQDGTCSVSYLPVLPGDYSILVKYNDKHIPGSPFSAHITGDDSMRM
SHLKVGSAADIPLDIGELDLSQLTASLTTPSGREEPCHLKMLRNGHVGISFVPKEIGEHL
VNIKKNGRHIPSSPIAVMISQSEIGDASRVRVTGQGLSEAKTFEPAEFIIDTREAGYGGL
SLSIEGPSKVDINTEDQEDGTCKVTYCPTEPGNYIINIKFADQHVPGSAFTVKVTGEGRM
KESITRKKRAASVANVGSQCDLSLKIPEISIADMVAQVTSPSGQVQEADIMEGENNTYCI
RFVPTETGVHTVCVKYAGVHVPGSPFQFTVGPLGEGGAHKVRAGGPGLERAEAGVPAEFS
IWTREAGAGGLSIAVEGPSKAEITFEDRKDGSSGVSYMVQESGDYEVSIRFNEEHIPDSP
FVVPVASPSDDARRLTVASLQESGLKVNHPASFAVSLNGAKGQIDAKVHSPSGALEGCCV
TELDQDKYAVRFIPRENGLYLIDVKFNGSHIPGSPFKIRVGETGQAGDPGMVTAYGAGLE
GGTTGTACEFVVNTSKAGPGALAVTIDGPSKVKMDCVECPEGYKVTYTPMAPGNYLISIR
YGGPYHIVGSPFKAKITGSKLVSSHSNHETSSVMVDPVTRQVSSSHQGAPSQSDASCVTA
KGLGLSKGFIGQKNNFSVDCSKAGRNMLLVGVDGPRVPCEEVLVKHLGNRVYNISYQLKE
KGEYILVVKWGEQHIPGSPYHITV
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttcccacctccgccaacaccagtcggcccagcctgcattcaacgccctttcc
ccggacaaagaagcagacatgcctgctacagagaaggaccttgccgaggacgcgccgtgg
aagaagatccaacagaacacgttcacccgctggtgtaacgagcatctgaaatgcgtcaac
aaacgaatcgccaatctccagacggacctcggcgacgggctgcggctgatcggactcctg
gaggtgttgagccagaagaagatgttcaggaaatacaaccagcggcccactttccgacag
atgcagctcgagaacgtctcggtggcactcgagttcctagacaaggagaacatcaagctg
gtgtccatagactccaaggccatagtggatggtaacctgaagctgatccttggcatggtg
tggacgctgatcctccactactccatctccatgcccatgtgggacgaggaggaggagggg
ggtgacggccagcagaagaccccgaaacagagacttctgggatggatccagaacaagcta
ccagagatccccatccacaacttcagcagagactggcagagtggcagagcactgggggca
ctggtcgacagctgtgctccgggcctgtgccctgattgggaccagtgggaccagactaaa
ccagtggacaacgcccgtgaggccatgcaacaggctgatgactggctgggtatccctcag
gtgataaccccagaggagatcgttgaccctaatgtagatgaacattccgtgatgacatac
ctgtcccagttccccaagtccaaactgaagcctggcgcacccctccgccccaaactgaac
cccaagaaggcccgcgcatatggaccaggtatagagccagtaggtaacgttgtgatgaag
aaggcgatgtttacagtggagaccatcagtgctgggatgggagaggtgctggtgtatgta
gaggaccctgccggacacaaagaggaggccaaggtgacagccaacaacgataagaatcgt
acctactcagtcttctacattcccaaagtcactgggatgcacaaggtgacggtgctgttt
gcggggctacacatcaataagtctccttatgaggtggatgtggggatggctcagggagac
agcagtaaagctacagcccagggacctggactagaacctgccgggaacatcgccaataag
accacatactttgatgtctacaccgcaggtgctggtgtgggagaggtggaggtggtgatc
atggacccagcgggtaagaaggacgtggtggtgtgtcagatagaggataagggcaacagt
tcgtaccgctgcacctacaaacccaccctggagggggcccacaccatctacgttaccttc
gctggaggacaaatcagcaagagccccttcactgttaacataggagaagcttgtaacccc
agcctggttcgggctaaggggcgtggtctgcagcccaaaggcctcagggtgaaggagacg
gctgacttcagagtcttcactaaaggagctgggactggagaactcaaagtcaccatcaag
ggccccaagggtttggaggagccctgtaagaggaaggatctaggagacggagtgtttggg
tttgagtactaccccaccacccccggaacatacagtataaccatcacctggggaggacaa
cacatcccccgcagcccgttggaggtgaagattggtttggaggcgggtccacagaaggtg
cgagcatgggggcccggcctggagagcggcattgtgggtaaatctgccgacttcgtggtc
gaagctgttggagagaatgtgggaacactgggtttctcagtggagggtccgtcccaggcg
aagatcgagtgtgatgataagggcgacgggtcatgtgacgtgcggtactggccaatggaa
gcaggagagtatgcggtgcatgtgctctgtaacaacgaggacatccagcactctcccttc
atggctgaaatcactgctgctctaaacaaggactactaccctgataaggtgaaggcgtat
ggtccaggcctacagagcagtggtcttgctgtggggaaacccactgagttcaccgtcgac
gccaagctgggagggaatgctgccctcaacatcctggcacaggatggtgagggaacccca
gtagatgttcaggtgaaggataacggtaatggaacgtacacctgcagttacacccccaag
aaacccctcaaacacaccgtcatggcgtcctggggcggggtcaacataccggacagtccc
ttcaggatgactatcggagcaggctgccaccctaacaaggtgaaggtgtcaggtcctggt
gtggctaaaacagggctgaaggcatttgaaccaacattcttcactgtggactgtgctgag
gcaggtcaaggtgacatcagtatcggtataaagtgctctccaggcgtggtgggaccggcg
gaggcagacatcgacttcgacatcatcaggaacgacaacgacacgtttaccgttaaatac
accccgccaggcgctggtagttacactatcatggtgctgtttgctgaccagaccatcccc
atgactcccatcaggatcaaagttgacccgtcacacgacgccagcaaggtcaaggccgag
ggacctggactcaaccgcagtggtgtggagttgaccaagccgacccacttcacagtaaac
accaaggctgcaggtaaagccaagctggacgctgtgttctccggcccggctaaaggagag
gctgttaaggactttgagatcattaacaaccatgacaacactcacacggtcaagtacacc
cccatccagcaggggcctctgggagtggccgtcacctacggcggagattctattcccaag
agccccttctccatccctgtggctccaagcctcgacctcagcaagatacaagttgatgga
ctgggagacaagataacagtgggtaaggaccaggaagtgaccgtgaagtccaagggagca
ggaggtcaggggaaggtgggagctaaggttacagggccctctgggaaacctgtcacctgc
aaggtggaaccggggcttaaaccagagaccagtcaggtgaagtttatccctcgagaggcg
gggccataccaggtggagctgacctatgacagcgctcccatcccaggatcccctttcaaa
cccaccgcctacccccccactgatgccaccaaggtgaagtgttctggcccagggttggag
cgtgccaaggtgggagagactggggagtttgtggtggactgtaccaatgcaggtccagct
gagctgaccatagagatcatcagtgacagcgggacagaggcagaggtccacatccaggat
aatggagacggaacctacaccatcacctacatccccctgtaccccggctcctacaccctc
accatccgctacggggggcaggatgtacccaacttccccgcccgcctcacagtggagccg
gccgtcgacgccagtggaatccgcgtgttcggaccgggagtggagggcaaaggcgtgttc
cgcgaggcgaccacagatttcacggtagacgccagagctctgaaccagacgggagggaac
cacatcaagacagtgatccagaacccatctggctccgttaccgacgcggtcatcaccgac
cgccgtgatggcacctacaacgtagagtacactccctacgaagagggtccccacagtgta
aaggtggcgtacgatgagtctccagttcccaaaagtccgttccgcgtggcagtgacagag
ggttgtgacccggggcgtgtacgtgcacatggacccggcttggacagtggcatcaccaac
aaagccaacaagttcactgtggaaacccgtggtgcgggtacaggtggtctgggtctggct
gtagagggcccatccgaggctaagatgtcctgcaccgacaacaaagatggcagctgcagc
gtagagtacattccctacgaggctggaacgtataatctcaacatcacctacggagggcag
cccatcgctggcagtccattccaggttcctgtcagtgacacggtggacagttctaaggtg
aagtgccagggggtggggcttggaaccaacgtgcgtgccaacattccacaggccttcaca
gtggacgcctctaaagcaggagtcgcccctctccaagtcagagtacagggacccaaaggt
gtagtggagccagcagagttggtggataatggagaccagactcacaccgtgaactacatc
ccgaccagagagggaccttactctatcaatgtactgtatgctgaccaagagatcccacgc
agtccctacaaggtgaaagtgttgcctacccatgatgccagcaaggtgcgcgccagtggc
cccggtctcaacaccaccggagtgcccgcctctctgcctgtcgagttcaccatcgacgcc
aaggatgcaggagaggggctgctcgccgtgcagatcactgaccccgaggggaagcctaag
aaggccagtatccgtgacaaccaggatgggacttacctggtgtcttatgtacctgacatg
actggtcgttacaccatcctgataaagtatggaggggacgagataccttattccccctac
cgcatcagggctctacctactggggacgccagcaaatgtactgtcacagtgtcaatcggc
ggccacggcctgggagccggtgtgggtccaaccatccagatcggagagcagactgtcatt
actgtggatgcaaaggctgctgggaaaggaaaggttacgtgcagtgtatgtaccccagaa
ggggtggagttagatgtagacgtggtggagaatgaggatggaacctttgatatcttctac
actgccccccagcctggagattactgtatctgtgttcgctttggaggggaactcatcccc
aacagccccttcctggtcacggcattggaaggagccccttcagatcagctcctccaacag
caacaactaccacagtactacagtcaacagccctgggcaacagaccggccaatgggaatg
aatggtttggacgtggcgggactccggccgtttgacctggttatccccttcaccatccaa
aaaggagagatcacaggtgacgtgcgcatgccgtcaggtaagacagccaagccagacatc
acagacaataaggacgggacggtaacggttaaatacgctccgactgaggccggcctgcac
gagatggacatcaaatacgacgggatacacatccctggtagtccactccagttctatgtg
gactatgtgaacagtgggaacgtcagtgcatacgggccgggcctgatccacgggaccgtc
aacaaacctgccatgttcaccgtcaacaccaaggacgcaggagagggtggtctgtctctg
gccatcgagggtccttctaaagctgacatcagctgtgtggataaccaggatggaacatgc
tctgtgtcctacctgcctgtcctacctggggactacagcatcctggtcaaatacaatgac
aaacacatccctggcagccccttctcagcccacatcacaggtgatgactctatgaggatg
tcccatctgaaggtgggctctgctgctgacatcccattggacattggcgagctggacctg
agtcagctgacagcctctctgaccacgccctccggccgagaggaaccctgccacctcaag
atgctccgcaacggacacgtcggcatctcgtttgttcccaaggagatcggggagcacctg
gtgaacattaagaagaacggacgccatattcccagcagccccatcgccgtgatgatcagc
caatcggagattggtgacgccagtcgggtgcgagtgactggccagggcctcagtgaggcc
aaaacctttgaacctgctgagttcatcatcgacacacgcgaagcaggctatgggggtctg
agtctgtccatcgaaggccccagtaaggtggacattaacactgaggaccaggaggatggg
acctgtaaggtcacctactgccctactgaaccaggaaactacatcatcaacatcaagttc
gccgaccaacacgtaccagggagtgcgttcacggtgaaggtgacaggagaagggaggatg
aaggagagtatcaccaggaagaagagggcagcgtctgttgctaacgtgggcagccagtgt
gacctcagcctgaagatcccagagatcagcatagcagacatggtggcccaggtgaccagt
ccgtctggtcaggtccaggaggctgacatcatggagggagagaacaacacctactgcatc
cgctttgttcccacggagaccggcgtacacacagtgtgtgtgaagtatgcgggcgtgcac
gtacccggcagccccttccagttcacagtggggcccctgggagaaggaggagcccacaag
gtccgcgctggggggcccgggctggagagggcagaggctggagtaccagcggagttcagt
atctggacgcgggaggcaggtgcagggggtctcagcattgcggtggaggggcccagtaaa
gcagagatcacctttgaggaccgcaaggacggatccagtggagtatcctacatggtccag
gagtcaggagactatgaggtgtctatccgtttcaatgaggagcacatccctgacagtccc
ttcgtggttcccgtggcgtcgccctctgatgacgccagacgactcactgttgccagtctt
caggagtccgggttgaaggtcaatcacccagcatcctttgctgtgagcctgaacggagcg
aagggacagattgacgctaaagtccacagcccctctggagccctggagggctgctgtgtt
actgagctagaccaagataagtatgctgtccgattcattcccagagagaacggtctgtat
ctgatcgatgtgaagttcaacggcagccacatccctggcagtcccttcaagatcagggtg
ggggagacgggacaggctggagacccaggcatggtgaccgcatacggagctggattagag
ggaggaaccactggtacagcctgtgagttcgtggttaacaccagtaaggcgggccctggg
gccctggcggtgaccatcgacggcccctccaaggtgaagatggactgtgttgagtgtccg
gagggttacaaggtgacctacacccccatggctccaggaaactacttaatctccatcaga
tacggaggaccttaccacatcgtaggatcccccttcaaggccaagatcactggctccaag
ctggtcagtagccatagtaaccacgagacgtccagtgtcatggtcgaccccgtgactcgc
caggttagctcttcccaccagggagctcccagccaatcggacgccagctgtgtgacagcc
aagggtctcggcctatcaaagggctttatcggccagaagaacaacttcagcgtcgactgc
agcaaagcaggtcgtaacatgctgttggtgggtgtggacgggcccagggttccctgtgag
gaggtactggtgaagcaccttgggaaccgtgtctataacatcagctaccagctcaaggag
aagggagagtacatcctggtagtgaagtggggagaacaacacatccctggcagcccctac
cacatcactgtctag
DBGET
integrated database retrieval system
