Oncorhynchus tshawytscha (Chinook salmon): 112222529
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Entry
112222529 CDS
T05605
Name
(RefSeq) regulating synaptic membrane exocytosis protein 2-like isoform X1
KO
K15297
regulating synaptic membrane exocytosis protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222529
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112222529
Small GTPases and associated proteins
Rab associated proteins
112222529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PDZ
PDZ_6
Nudix_N_2
Motif
Other DBs
NCBI-GeneID:
112222529
NCBI-ProteinID:
XP_042160675
LinkDB
All DBs
Position
LG23:16593397..16816411
Genome browser
AA seq
1631 aa
AA seq
DB search
MSAPLGPRGPGAPPPAGALPDLPDLSHLTEDERKIILGVMDRQKKEDEKEQSMLKKLHQQ
FESYKDQVKKMGDDTTPQTGTTGEPQKNPNDSPTCGICHKTKFADGCGHLCSYCQTKFCA
RCGGRVSLRSNKEDKVVMWVCNLCRKQQEILTKSGAWFYSSAAGPRGGSEGPRGRRHEEA
PQEKKAKLQQDLLYQGPPGDISADRSRPPGLPRQGSLNNGSGLRHSGQGQDIDRKRSPSA
SRDTNQKYDQREERGQYAPGDGTMPRSPSDYGDGDPRRGAPRRYQDAEAARGEYRGGRGR
WRSQEDYPLDQDGPYPLDGPYPLDGQPSEYELQRQRQEEYQTRYRSDPNLARYPVKPQPY
EEQMRMHAEVGRARHERRHSDVSLAYTEQDEPQGPIRLSRQHLTERRPPMVGQRSYSMDR
NSPTPGGHHRTSNHSPPTPHRSPVLGDRSGDMRRGPGEPIGFRGHDYLDPSSAVRKTKRE
KMDTMLRNDSLSSDQSESIRPPPPKPHKTKKGGKMRQVSLSSSEEELATTPEYTSCEDVE
IESESVSEKGDSQRGKRKTIEQAFLSDSTHNTLSERQKKMVRFGGHSLEEDAEWCEPQVK
DSGVDTCSSTTLNEDNQHSHSEKNPVTWQPSKDGERLIGRILLNKRMKDGSVPRDSGALL
GLKVVGGKMTESGRLCAFITKVRKGSLADTVGHLRPGDQVLEWNGRFLQGATFKEVYNII
LESKPEPQVELVVSRPIGDIPRIPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPGMLR
DAPQYLSGQLSSQSLSRRTAPFVPRVQVKLWYDKVGHQLIVTILGAKDLPSREDGRPRNP
YVKIYFLPDRSLNYCSSSDKSKRRTKTVKKSLEPKWNQTFMYSPVHRREFRERMLEITLW
DQARVREEESQFLGEILIELETALLDDEPHWYKLQTHDVSSMPLPRASPNPQRRQLHGES
PTRRLPIQRSQRISDSEISDYDCEDGVGVVSDYRQNGRDLHSSTLSVPEQAMSSNHCSRS
ADMNRARSRSPSVPPPQSRSLDPGYDIDPASSQYSSSSRVDRRSVSDDHHSPDSRNHRIS
NISREEAVRLLRSTRMSRAHSEGAYSSSASVDYDYKRNHGAVDRHVYHSRSRSADQRPAL
ERTTTSRSRSTERPDSALMRSMPSLPSGRSAPPSPALTRANPRSGSAQTSPTSTPMSDRR
GGRQLPQLPPTGTKGRKDTDSPGWTSSGAMDVEERTRQMKLKVNKFKQGAVCDSRLEQDY
NKRRDGQRGSDNMSAKSSDSDVSDVSAVSRTSSASRFSSTSYMSVQSERPRGKQKISDFA
SKMKNRQLGTSSGSMNMTKSTSIGGDMCNLEKTDGSQSDTGVGMVGGDEDKKRRSSIGAK
MAAVVGLSRKSRSTSQLSQTEAGGKKLRSTVQRSTETGLAVEMRSRMTRQASRESTDGSM
NSYSSEGNLIFPGVRLSSDAQFSDFLDGLGPAQLVGRQTLATPPMGDIQIGIVDKKGALE
VEVIRARGLVGKPGSKALPAPYVKVYLLENGACIAKKKTKVARKTLDPLYQQQLPFEEAP
GGKVLQIIVWGDYGRMDHKSFMGAVQILLDELDLSNMVIGWFKLFPPSSLVDPTLAPLTR
RASQTSLDSRS
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccactcgggccccggggcccaggcgcccccccgccggctggagccctaccc
gacctgccggacctcagccacctcaccgaggatgagaggaagatcatcctgggcgtcatg
gaccgacagaaaaaggaagatgagaaggaacagtcaatgctaaagaagttgcaccagcag
tttgagagctacaaggaccaggtgaagaagatgggggacgatacgaccccgcagacgggg
acgacaggagaaccccagaagaaccccaatgactctcctacctgcgggatttgccacaaa
accaaattcgctgacgggtgcggccacctctgttcatattgccaaacgaaattctgtgct
cggtgcggaggacgagtgtctctgcggtcaaataaggaggacaaagtggttatgtgggta
tgcaacttgtgccgaaaacaacaagaaatcctaaccaagtcgggagcgtggttctacagc
agcgccgcagggccacggggcgggtctgagggccccaggggtcgacgtcacgaggaggct
ccccaggagaagaaggccaaactgcagcaggatctcctctaccaggggcccccaggggac
atatcagcagatagaagcagacctcccgggctccccagacaaggctccctcaacaacggc
tcagggctgaggcactcaggtcaaggacaggacatagacaggaaacgaagcccatcagca
tctagggatacaaaccaaaaatacgaccaaagggaggagcggggtcagtatgccccgggg
gacggcaccatgcccagatcaccgtccgactacggggatggggaccctcggcgtggggcc
ccacggaggtaccaagacgctgaggcggcgcggggggagtatcgtggtgggcgtggccgc
tggcgctcccaggaggactaccctctggaccaggacgggccctaccctctagacgggccc
taccctctagacgggcagcccagtgagtacgagctgcagcgccagcgccaggaggagtac
cagacacgctaccgctccgaccccaacctagcccgttaccccgtcaagccccagccctac
gaggagcagatgaggatgcatgctgaggtgggccgggccaggcacgagaggcgccacagt
gatgtgtctctggcctacacggagcaggacgagccccagggaccaatccgcctgtccaga
cagcatctgaccgagcgccggccgcccatggtgggccaacgctcctactccatggacaga
aactcccccacccctggaggccaccaccggacctccaaccacagcccccccaccccacac
cgcagccccgtgctgggggataggtcaggggacatgaggcgggggccaggggagccaata
gggttcaggggtcatgattatctggaccccagctctgcagtcaggaagaccaagagggag
aagatggacaccatgttgaggaacgactctctgagctctgaccagtccgagtccatcagg
ccgccgccaccaaagccccacaaaaccaaaaaggggggtaagatgcggcaagtgtccctg
agcagctcggaggaggaactggccaccacgccagagtacaccagctgtgaggacgtggag
atagagagtgagtctgtcagtgagaaaggggacagtcaaagggggaaaagaaaaactatt
gagcaggcatttttgtccgactcaacacacaacaccttatctgagaggcaaaagaaaatg
gttcgctttgggggccactcattggaagaggacgcagaatggtgcgaaccccaggttaaa
gactctggcgttgacacatgcagtagcactaccctaaacgaggacaatcagcatagccat
agtgagaagaatccagtgacatggcagccctccaaagatggggagcgcctaatagggcgg
attctgctcaacaagcggatgaaggatggaagtgtacctcgagactcaggagcactgctg
ggactgaaggtggtgggtggaaagatgacagaatctggtagactttgtgctttcatcact
aaagtgaggaaaggaagtctagcggatactgttggacacctcagaccaggcgaccaggtg
ctggagtggaacgggaggtttttacaaggagccacatttaaagaagtttacaatatcatt
ctagaatcaaagccagaaccccaggtggaactggtggtctcaaggcccataggagatatt
cctcggataccagacagcacacatgcacaactggaatcaagttcgagttcctttgagtct
cagaagatggatcgcccctctatctctgtcacgtctcccatgagccccgggatgctgcgg
gatgccccccagtacctgtcaggacagctctcaagccaaagccttagtagaagaacagcg
ccttttgtccctagggtccaggtcaaactgtggtatgacaaagtgggccatcagctaata
gtgaccatcctgggagccaaggacctgccttctagggaagatggccgccccaggaaccct
tacgtcaaaatctacttcctccctgacagaagtttgaattattgttcctccagcgacaaa
agcaagaggagaacaaaaacggtaaagaaatccttagagcccaaatggaaccagaccttt
atgtattctcctgtgcaccggcgggagttccgtgagcgcatgttggagatcaccctgtgg
gaccaggccagggtcagggaggaggaaagccagttcctgggagagatactgatagagctg
gagacagccctgctggatgatgagcctcactggtacaagctgcagacccacgacgtgtcc
tccatgcccctcccccgcgcctcgcccaacccccagcgcagacagctccacggagagagc
cccacgcggaggctacccatacagagatctcagagaatcagcgacagtgagatctctgac
tatgactgtgaagacggtgttggggtagtgtcagactaccggcagaacggcagggacctt
catagttccacgttgtctgtcccagagcaggcgatgtcatccaaccactgctcgcggtcg
gcagacatgaaccgtgcgcggtcgcggtcccccagcgttccccctccacagagcagaagc
ctggaccccggctatgacattgaccccgcctcatctcagtacagctcctccagtagagtg
gaccggcgcagtgtgtccgatgaccaccactcacctgacagccgcaaccaccgcatatcc
aacatcagtcgagaagaggctgtcaggttactgcgctccactaggatgtcccgagcccac
tcagagggcgcgtactcctcctctgcttccgtcgactatgactacaagaggaaccacgga
gccgttgacaggcatgtgtatcacagcaggtccaggtcagctgaccagcgtcccgcgcta
gagcgcaccaccacctcccgctcgcggtccacggagcggcctgactccgccctcatgagg
tccatgccgtctttaccctccggacgctccgcccctccctcacctgccttaacgagggcg
aacccccgcagcggatcggcccaaaccagccccaccagtacccccatgtccgacaggaga
ggaggtcggcaactaccacagcttccacccacagggaccaagggcagaaaagacacggac
tcaccaggttggaccagctcaggtgctatggatgtggaggagaggaccagacagatgaag
ctgaaggtgaacaagttcaagcagggggccgtgtgcgactccagactggaacaggactac
aacaagaggagggatggtcagcggggttcagacaacatgtcagccaagtcttcggacagt
gatgtaagcgacgtgtccgctgtgtcgagaaccagtagtgcctctcggttcagcagcacg
agctacatgtctgtccaatcagaacgtccgcgaggaaagcagaagatcagtgactttgcg
tccaaaatgaaaaacaggcagttgggcacgtcatcaggaagtatgaacatgaccaagagc
acaagtatcggtggagacatgtgcaacctggagaagacggacggcagccaatcggacacg
ggcgtgggcatggtaggcggggacgaggataagaagaggcgctccagtattggtgccaaa
atggcggcagtggttggcctctcgcggaaaagcaggagtacctctcagctcagccaaaca
gaagccggtgggaagaagcttcgcagcaccgtgcagaggagcacagagacgggcttggcc
gtagagatgaggagcaggatgactcggcaggccagcagagagtccaccgacggcagcatg
aacagctacagctccgagggaaacctgatcttccctggtgtgagactgtcctccgacgcc
cagttctctgacttcctggatggactaggcccagcccagctggttggacgacagacgcta
gctacaccacccatgggtgacatccagattggaatcgtggacaagaaaggagcgctggag
gtggaagtgatccgagcccgtggccttgtgggaaaaccaggttccaaggcactgccagca
ccatatgtaaaggtgtatcttttggaaaacggagcctgcatagccaaaaagaaaacaaaa
gtagcaagaaaaaccttggaccccctttaccagcagcaactgcctttcgaagaggctcct
ggagggaaggttctacagatcatcgtatggggagactacggacgcatggaccataaatcc
tttatgggagcagttcagatacttttagatgagctggacctgtctaacatggtgattggc
tggttcaagctctttcctccttcctcattggtggaccctaccttggcccccttgacaaga
agagcttcccaaacgtcattggatagccggtcatag
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integrated database retrieval system
