KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112222541
Entry
112222541         CDS       T05605                                 
Name
(RefSeq) integrin alpha-8 isoform X1
  KO
K06584  integrin alpha 8
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04514  Cell adhesion molecules
otw04810  Regulation of actin cytoskeleton
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112222541
   04514 Cell adhesion molecules
    112222541
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112222541
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112222541
   04810 Regulation of actin cytoskeleton
    112222541
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:otw04515]
    112222541
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin alpha subunits
   112222541
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 112222541
NCBI-ProteinID: XP_042160613
LinkDB
Position
LG23:complement(15206937..15257805)
AA seq 1056 aa
MCAYRMYAFGGMLCRVVSVLWPVLSVVSGFNLHAEHPAVYRGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPLNPDPTKQPYSCTQIPFDNTNNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRAVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVTVSDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCFLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVYFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPSNLDLPPVLNRYSSTFLQEQAYILLDCGEDNECIPDLQLTASIDRTEL
VVGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIEALSRLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDSSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKENPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTDGPISCRSNTSLNPLGLQTSSVQDTPELLGFLRNSSSPHRY
RRATNAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAIPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARPPADDVSDREQLTSDQLADA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgtgtgcctataggatgtatgcatttggtgggatgttgtgtcgcgtggtgtcggtgcta
tggcctgtcctttcggttgtctcgggcttcaacctgcatgcggagcaccctgcggtgtac
cgaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccctaaaccctgaccccaccaagcaa
ccctacagctgcacacagatacccttcgacaacaccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtcacaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtgctgtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagcgtggacttcaccaaggaggggacactggtggtgggtggacctggcagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggtgttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtgactgttagtgacctcaacggagatgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaaacccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttcttctgacgggaacacacacc
tttggacgctttggcactgccatcgccccactaggagacctcaaccaggacggatacaac
gacgtggcggtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcatccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggcagagatgatcctgactcctagaatcctg
aaccctgatgaccgatcctgcttcctgacagaatctgataccatggtgacctgtctaagg
gtagatatttgtgcaaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattggcttaaaggtgtgaggggcggagttaagagagtttatttcctg
gattcccatcagccccagcacacaggggtcctaacgcttggccacagccgtcctcactcc
tgcctgaactatactgtctacctacgaggggaggatgagtttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctgtt
ctcaaccgttacagcagtaccttcctgcaggaacaggcatatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctaactgcaagcatagaccgtacagagctg
gtggtcggggatgacaatctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagacagagttacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagaggctctatccaggttgaactgtgagtacaggatggtgaatgactccaga
ctggtggtgtgtgacctggggaaccctatggttgccggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacagctccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
ccgcattgggagcccaaagagaatccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacagac
ggaccaatcagctgccggagcaacaccagcctcaaccccctgggcctacagacatcctct
gtccaggacactccagaactgttgggctttctgaggaacagtagctctcctcaccgctac
agacgtgccacaaatgctgcccagccctacagcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgtagtc
aagatccgctcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactctaccgtgtccttcagagtgacggccctgccctaccgcctccaaccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtggggaactcctgatgtggcg
tttgctattcctctgtgggtcatcatcctagccatcctactgggactgctggtcctggcc
atgctaacactggccatgtggaagtgtggtttctttgaccgggctcggccgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagatgcctaa

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