Oncorhynchus tshawytscha (Chinook salmon): 112222574
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Entry
112222574 CDS
T05605
Name
(RefSeq) C-type lectin domain family 4 member E-like
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112222574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112222574
04091 Lectins [BR:
otw04091
]
112222574
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112222574
Lectins [BR:
otw04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
112222574
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
DGF-1_N
Motif
Other DBs
NCBI-GeneID:
112222574
NCBI-ProteinID:
XP_042160409
UniProt:
A0AAZ3S3W4
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Position
LG23:complement(5279777..5284175)
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AA seq
254 aa
AA seq
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MEVENYTSLHEFTEDTSSRGNKPILNNHSAQGLKRGSECLRGQTALFVLIGLLASICANI
ALSVLLLSRPLPSVPLETASLTLKLNSVQGRYVRLCDDYSKLGQSCSKTVSKCRECPEGW
IHVDEKCYSFSNDKMDWPSSRDSCTSLGSHLTILHSKEQHDALEKEARRIGGFDYHFWIG
LSDIEKEGDWRWVDNTTLTNKYWNEYSSEPDNHQSGGSHGEDCATLDSHSQTWFDVPCDH
IYKRICQMDAIRLD
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagagaactataccagtctacacgagtttactgaggatacatcctccagagga
aacaagcctatcctaaacaaccacagtgcccaggggctgaagagggggtcagagtgtctc
agaggtcagacagccctctttgtgctgattggtctattggcctccatctgtgccaacatc
gctctgagcgtgctcttgttgagcaggccgttacctagtgttcccctggagacagcatct
ctgaccctgaagctgaactcagttcaaggacgttatgtccgtctctgtgatgactactcc
aaactgggccagagctgctcaaagacagtaagtaagtgtagggagtgtcctgagggctgg
attcatgtagatgagaaatgttactccttcagtaatgacaagatggactggccgagcagc
agagacagttgtacttccctgggcagccaccttaccatcctgcacagcaaggaacagcat
gacgctctggaaaaagaggcccggaggattggcgggtttgactaccacttctggattggc
ctatcagatatagagaaggaaggggattggagatgggtggacaacacaacactgacaaat
aagtattggaatgagtatagctctgagcctgacaatcatcaatcaggaggatcacacggg
gaggactgtgccaccctggacagccattcgcagacctggtttgacgtaccgtgtgaccac
atctacaaacgcatttgtcagatggatgccatccggctagactga
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