Oncorhynchus tshawytscha (Chinook salmon): 112222616
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Entry
112222616 CDS
T05605
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2-like
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
otw04148
Efferocytosis
otw04218
Cellular senescence
otw04310
Wnt signaling pathway
otw04370
VEGF signaling pathway
otw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112222616
04370 VEGF signaling pathway
112222616
04020 Calcium signaling pathway
112222616
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112222616
09143 Cell growth and death
04218 Cellular senescence
112222616
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112222616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112222616
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
112222616
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
112222616
NCBI-ProteinID:
XP_024241116
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Position
LG02:54296352..54306371
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AA seq
907 aa
AA seq
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MTSIYEENDPNSLELVEGLGQDNSEEELDFSYLFLYNPSEDDFRGNEDNSGVPPHDDHNP
PSMVPYPCEDSSSCAHTTSSQSSYYHGLVTDCLSGPGFNSLDLPSRPEGAPSPSPRIEIT
PSGDPHRTQPLDASPKSTALSVSSYENTAYREPQCPSPASSNSSTGWLSKSCSHWVSPCV
SPSGDGDAVGLTTLDHLQGIHMSMAHSSPGTSPCTSITEETFLVLQSQRSSSPHSHTHPR
SRSASPQGKRTYDQYSGPSLETTSQQQRFRSLSPSPHHPQGPQAQADPQANAPEQAPSLE
EVLSSPSSSLPRAVPSKMVQPNVECYMYRESQEGGYVHLMEQGRRGKAGAETYILPTSVW
PVPLAHGAISSIPVPSLPPLDLQLPSHSDQYELCLEQQPKQHHCAHYETEGSRGAVKAPG
GGHTVVQLHGYRGKAPLGLLVFIGTADKRLLKPHAFYHVHRITGKTVTTPSNEIMVNSTN
VLEIPLEPKNNLRAVIDCAGILKLRNADIELRTGETDIGRKNTCVRLVFRVHIPHPGGQY
VSLQVASLPIECSQRLAHQLPTVESQDVDRCSVLGGQQMILTGQNFTSYSKVVFTKNTPD
GLQIWELEASVDRDKRVTSMLFVEIPPYRDHTIYRAAKVNFYVINGRRKRSQAQHFTYPP
LTVPAIKTEPIDDFQFGQLGCTVSKVLGMSPKTYHDTPSSHLTPNSHEAGLTTLAACHDD
HDSTRLHHNSIVRLSAYQQQDPSVYYPSKIRSLGSSPVLYQDMNHHHMVMIHYGSPSQMS
YIGSQHYSTLVSQPFNHSHSATNQRVVNIAVPLAQHQHVTMVGDGYRAAPSSWKVDASPE
ACSSEGQYQNFMLMVLPVLGTSPRLPPRNSPTLAQRGPITGIQSGPVLEKVIVKQGNLNQ
VYLDDGE
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgacttccatctacgaagagaatgatccaaattctttggagcttgtggaaggtcttggt
caagataacagtgaagaggagttggacttctcctacctgtttttgtacaacccatctgag
gatgactttcgcgggaatgaagacaactcaggggttccccctcacgatgatcacaaccct
ccatctatggtgccctacccttgtgaggacagttccagttgtgcccatacaacctccagt
cagtcctcctactaccatgggcttgtcactgactgcctgtctgggcctgggtttaattcg
ctggatctcccctccaggccagagggtgctccctcccccagccccaggattgagatcacc
ccatctggggaccctcaccggactcagcccctggatgccagccccaaatcgacggccctg
tctgtttctagctatgagaatacagcctatcgagagcctcagtgcccaagccctgccagc
agcaactcctccacgggctggttgtccaagtcttgctctcactgggtctctccttgtgta
tctcccagtggtgatggggacgcggtaggcttgaccaccttggaccacctccaaggcatc
cacatgtccatggctcactcctccccagggacctccccatgcaccagcatcacagaggag
acattcctggtactgcagagtcagcggtcatcctccccccactcccatacccacccgcgc
tctcgctccgcctctcctcagggcaaacgcacctacgaccagtacagcggacccagcctg
gagaccaccagccagcaacagcgcttccggagcctcagcccctcaccccaccacccccaa
ggaccccaggcccaggctgacccacaggccaatgcccctgagcaggctcccagccttgaa
gaggtgttgagcagccccagttccagcctgcccagggcggtgccctccaagatggtgcag
cccaatgtggagtgctacatgtacagagagagccaggagggtggctatgtgcacctcatg
gagcaggggaggagaggcaaagctggggctgagacctacatcctccctacatctgtctgg
ccagttccactagcccacggagcaatcagtagcattcctgttccatctctgccccctcta
gatttgcaattgcccagtcactcagaccaatatgagctctgtctggagcagcagcctaaa
cagcaccactgtgcccactatgagacagagggcagcaggggagcagtcaaagcacctggt
ggaggacacactgtggttcagcttcatgggtacagaggcaaagctcccctgggtctgctg
gtgttcatcggaacagctgacaagaggctcctcaagccccatgccttctaccatgtgcac
cgcatcacggggaaaaccgtcaccacccctagcaacgagataatggtcaatagcaccaac
gtcctggagatccctctggagccaaagaacaacctgagagcagtgattgactgtgctggg
atcctaaagctgaggaacgctgacattgagctgaggacaggagagacagacatcggacgg
aagaatacctgtgtccgtctggtcttccgggtacatattccccatccaggaggacagtat
gtctctcttcaagtggcctcccttcccattgagtgttcccagaggttggcccaccagctt
cccactgtagagagtcaggacgtagaccgctgctcggttctagggggacagcagatgata
ctgaccggacagaacttcacctcttattccaaggtggtgttcacgaagaatacacctgat
gggctgcagatttgggaattggaagcatcagtagaccgagacaaaagagttactagcatg
ctgtttgtcgagatccctccatatcgagatcacaccatttatcgcgcggctaaagttaac
ttctatgtgatcaacgggaggaggaaacgcagtcaggcgcagcacttcacctaccctcct
ttaacagttcccgccattaaaacggaacccatagatgacttccagtttggccagctgggt
tgtactgtgtccaaggtcctaggaatgtcacccaagacctaccacgacacccccagtagc
caccttacccctaatagccatgaggctggcttgacaaccttagcagcctgccacgacgac
cacgactccacacgactccaccacaactccattgtcagattgtcagcctatcaacaacaa
gacccatctgtctattaccccagtaaaatcagaagcctgggcagcagccctgttctgtac
caagatatgaaccaccaccacatggtgatgatccactatggctccccatctcagatgtcc
tatatcggtagccagcactactctaccctagtctcccagcctttcaaccattctcactct
gccaccaatcagcgagttgtcaacattgcggtcccattggcccaacaccagcatgtcact
atggtgggtgatgggtaccgggctgcaccttcatcatggaaggttgatgcctcgccagag
gcctgttcatcagaaggccagtaccagaacttcatgctgatggtgttgccggtcttgggc
acatctccacgactaccaccacgaaatagccctaccctggcccagaggggtcctataacg
gggatccagagtgggccagtcctggagaaggtgatagtcaagcaaggaaacctgaaccaa
gtctatctggatgatggtgaatga
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