Oncorhynchus tshawytscha (Chinook salmon): 112222717
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Entry
112222717 CDS
T05605
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112222717
Enzymes [BR:
otw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
112222717
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112222717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
112222717
NCBI-ProteinID:
XP_024241209
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All DBs
Position
LG23:complement(24844513..24851114)
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AA seq
748 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKLLIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDEDDDKRKSGDEDMDEDDTVQANLDEMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDN
VDVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEI
QRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHY
MLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVV
GNIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQR
LAHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDF
GKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVEKDGEEETKP
SEAVEVTANSSDEDGPSKAGSKNKSKKQKPVPGKPAMSQKATANGKPAKSIGKKTTNPST
LKKSEKPTGQKKAKIAKMDGGTVKVDGELKKSNTVKTEGETTKELKEGSRFEKKGDKQRK
SPTQSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaatagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggtcaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggatgagggacaagagggtggggagaacaataaaggg
aaaaaactgctaattgaaggagatggtgacgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggggaagtagacggtgatggagaggagctgctcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagccatgggccaggagagtgat
gacgatgatgaggatgatgataagaggaagagtggagatgaagacatggatgaagatgac
acggtacaggctaatttagatgagatggacaaattcattctacctggagcagaggaaata
gcaaaagagggcgttttgcttgtagacctgcagaccatccaccagagaataaaggacaac
gtggacgttctctctcactttgctaccaagagggaggaggggaaagagagaacagagtac
ctctctctcctcaaaaaggatctttccacttactacagctacaacaatttcctcatagac
aaactgctggatatcttcccagtgtcagagctgattgatttcctggaggccaatgaaatt
cagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttggctcag
gccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtgggcctg
gtcatctttgactcctcagtacccatcggtgcgaccccagagtacctagctggtcactac
atgctgcagggagcctccagcttcctgcctgtcatggctctctctccccaggagggggag
actgtgctcgacatgagctcagctcccgggggaaagaccacctatatggcccagttgatg
aggaacacaggagtgattgtggccaatgatgccagtgctgacagactgaagagtgtggtg
ggcaacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcag
ttccctaaggtaatgggtgggtttgacagagtgctgcttgatgctccctgctcaggcaca
ggagtcatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatccaacgg
ttggcccacctgcagaaggagctcatcctggcggccatcgactcggtcaacgctgagtct
ccctctggaggctatctggtgtactgcacatgctctatcatggtggaggagaacgagtgg
gtagtggactacgctctcaagaaaagaaacgtcaaacttgtccagactggactggacttt
ggcaaagaaggcttcaccagattcaaagagagacgattccatccctctctgaaactctca
cgccggttctatcctcattcccacaacatggacggtttctttgtggccaagctgaaaaag
ttctccaacactgtcccaaccacagcagttgaaaaggacggagaagaggaaaccaagcca
tctgaggcagtagaggttacagctaattcctctgatgaggacgggccatctaaagcaggg
tctaagaacaagtccaagaagcagaagccagtccctggcaagccagccatgtcacagaag
gccacagccaacgggaagccagccaaaagcatcggcaagaaaacaacaaacccaagcacc
ttgaaaaagagtgagaaaccaaccgggcagaaaaaggcgaagatcgctaagatggatggt
gggactgtgaaagtggacggagagctcaagaagtccaacacagtcaaaacagaaggggaa
acgaccaaagaattaaaggaagggagcaggtttgagaaaaagggcgataaacagaggaaa
tcccccacgcagagcaagaagagaatggggaagaacaaattcaataagttgaagaagctg
ctgaaaaaagaagaggttggacaatga
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