Oncorhynchus tshawytscha (Chinook salmon): 112222728
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Entry
112222728 CDS
T05605
Name
(RefSeq) multiple epidermal growth factor-like domains protein 8 isoform X1
KO
K23664
multipile epidermal growth factor-like domains protein 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
112222728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
EGF_LMN_ATRN
Kelch_HCF
Kelch_1
CUB
Kelch_2
EGF_3
EGF_laminin
Beta-prop_Calicin
NANM
PSI
EGF_CA
DUF6242_C
EGF_Teneurin
PSI_integrin
EGF
Motif
Other DBs
NCBI-GeneID:
112222728
NCBI-ProteinID:
XP_024241222
LinkDB
All DBs
Position
LG23:complement(23192282..23222485)
Genome browser
AA seq
2875 aa
AA seq
DB search
MASLLHVPLLGLLLVAVAPGCCAGDCKGHRQVLRGPPGCVTDGPGNYSVNGNCEWLIKAP
SSNYRIVLNFTFMETECTYDYLFVYDGDSYQSPLLASLSGNTLPQPIEAKSGKMLLHLFS
DANYNLLGFNATYLFSVCPGACGGHGRCDTSSSLCQCHLGWGGADCSTPLCPQACILHGT
CDKRGERCLCSSDFLGQNCQLGLRDDSGVGQWWQVSGGDPYTPPRTGSAGVYLSSIGAMY
LFGGFDLNRALGDLVKYNFSLNQWENRSYGHSPVARHSHTAVEWKGNMVIFGGELMSGAL
ASDVWMYRPIQEDWQQLGQSHSPGAPRVANHAASVVDNYLYIFGGRTEEDMFSSSLYRFD
LRESGVWEAVQPTGGKPPATAGHSMVFHPPSRALLVYGGHRPTTARFSVRVNSTDVFHVD
QRFWTSFRSRFPATGPRERAFHSATIIGNYMVVYGGNVHIHYQEEKCYDEEIFFYHLGCH
QWVSAGSSLQHRGESVRGRYSHVAAVMEGRVLLVAGGYSGIARGDLVAYKVPLFVSSDPG
DRVSQEDAVCAEAPDESMCLKNPECSWCEGRCREYQPTNPCGSTGCLGLARFLSDCQSCL
VFSGAPGSLPRAPGDFGWCVQNESCLPVSDQSACRVDQISGAYGWWGERTRFLTTLLSCR
TENYVPGLHLLTFQHPRNDSQPDKVSILRSTSIILSPTTEMDVTLQFRGFIHPLWGAPPP
APPPTETVSMWARIQRLHFEARMAAGPNSLQLKEVVGRWAAHQEKETKLLSRPDMGRLFP
NLTRGNRYLVQAEGYLNNSGSGQTSEMALTWNRTALPGGSEISFLFLEPYRSGSCSGYQS
CLACLSDQSCGWCPSLGRCLFRALPALEPCPEDQGGGECHLLLAPPQCTLCEEYRDCSAC
TQDHYCEWQINASKKGDYQCSRRGKLDGSIRDPGGCPKVCNQRRTCGECLSNSSQCAWCE
SAQACFYFAAYLTKYPYGECRDWYDSVHSVPQCKQCSALVTCTDCLQTFQCGWCGDYNNP
TIGRCLRGDWGGMDDASVYNCSVAVDEVRATSPEPQTLAPPRPMELEHLEEGERDPVWSY
PSCPDVEECRLGLHSCHPFATCVNTPTSFECHCERGYTGDGILHCNQTCYNECREGQCSG
SPRFECECSLGWTSDPATLVLSGVECDVDCGCNFHSTCITAPGICDHCQDWTMGLQCEHC
RPGSFGSALAGGGGCVPCQCNGHGGPLLGYCHNQTGQCYCTHHTQGPHCESCLPGYYGDP
RNNGTCFRQCQGRSVILSHQSPLSELPISSSLGWRGGVGGKGGLSHCLWVLSVSENLVPC
VPGKLCPPVALTLHPDSYTQCTSSYVYVFDGLPRFLSNGVVHSDHNLIGAFCGTTRTQPI
TVEATSGVISVYFEANVSSDRPLGFNASFWVRRCRQGSEAGEDGSPVCQGGAQCSRGLCQ
CTQGYGGPYCDRPLCPEGCGLAEGRGSCNLSLGVCVCADGWGGSDCSTPLDSSSLVWETL
LDTQLTANQAHRFLHRMGHSLVSGPQGNLWMYGGLSLSEGILGNIYRYSVLERRWTQMLT
SSVEEGSTPSPRYHHASALLASHEPLSGGQGATHNLMLVVGGVTQKGVAVDTWSLNLSSL
VWRQHKSSVLPPVAGHTLTVRRDSSMLLIGGYSPENGFNHHLLEFNIHSGNWTVAPHTGT
PPTGLYGHSAVYHEQTDAVYVFGGYRFHVETVEPSGELYSLYYANLTWSLLVPSQGNKPL
SRFFHAAALIKDTMVIVGGRTGVEDYSNTVYLYQINCNTWIQPDSAVGEPVNRSVSLAMV
GWGGRLFLSGGFNGVTLGRLLTLTLPSDPCALLPTPEACNTTTGSCVWCRGTCAASDTAE
RLGCSIGQSPCSPTPRLPDQCRRLKTCSECLARHPRTFSSPSQSQSALQCKWCTNCPEGA
CISSTVSCTSEHDCRINQREIFLSSNCTETSCEASDCPKCTASGKCMWTRQFKRTGETRR
ILSVNPTYDWTCFSYALLNVSPMQVESSPPLPCPPPCHHLSTCNLCLGSRGSDGGWQHCV
WSMALQQCVSPSFVPLRCEAGQCGRLLSGGDSCSPQCAQLTQCSQCIACPQCGWCAARGG
NGAGRCQQGGLNGVSEGVCPQGNSSWSFLHCPEEDECANGHHHCNVTQDCHDLTQGYHCT
CKQGYVLSRVSGQCEPVCAQGCVNGTCVSPGVCQCHFGFVGDNCSSQCRCNKHSNCKGVS
EPDKCLECKNNTMGDHCEKCKPLYVGLAVGGGTCRPCREFCRGNSAVCLSRDEHKRALDH
PQDHPLDPDSIVQWVSEGPTEDSAVCVSCQNNSVGDKCESCLSGYFLLQGNCDKCQCNGH
ADTCNEHDGTGCPCQNNTETSSCLSSPQSDRKDCYRTQCAKCKDSFNGTPVNGRQCYRQF
NVDNECCFDPTSQTNCFHDPTIRNLPKGRTVFFAAQPKFTNVDIRVTIDVTFGEVEVYVS
NSHDTFIVEVDLHTGIHAIKIEDESVARGGASGGDKETPPSPMKVYANSSSSLGGAMLPN
TPLQLHAKPPGADREVREAKTEGLISYITVWKPQTVLIVRGVRDRVVITFPHEVHSLKSS
RFYIALRGVGAEERLGESQGLLFLRQDQAHIDLFVFFSVFFSCFFLFLSVCVLLWKIKQF
MDFRREQRRHIQEMTKMASRPFAKLTVYLEPEEPQLIYLPATGGGGVGGSAVSLAHARTG
KLGGIVVGQRGRAGAISYKHEPGSGPTVHHHLTLGGGGNSGQHLPLHYLNTHHYVPTNTT
ASHPHHHPSSHSGYQHFCRSDPFLSQLMGFSYSTFKVGPITLEPTDDGMAGVATVLIQLP
GGILAPNRACLGSALVTLRQNLQEYCGHGNGGGHPGVGGGRKGLLGHQHLTTMAM
NT seq
8628 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctcctccatgtccccctgctggggttgctgctggtggctgtagcccctggg
tgttgcgcaggagactgtaagggccacagacaggtgctcaggggccccccagggtgcgtc
acagacgggccagggaactactctgtaaacgggaactgcgagtggctcatcaaagccccc
agcagcaattaccgtatcgtcctgaacttcaccttcatggagacagagtgcacctacgat
tacctgttcgtctatgatggagactcctaccagagccccctactggccagtctgagtggc
aacaccctgccgcagcccatagaagccaagtctggcaagatgctgctccacctcttcagc
gatgccaactacaacctcctgggcttcaatgccacctacttgttctctgtgtgccctggg
gcctgcggaggtcacgggcgctgtgacacttcctcgtccctgtgccagtgccacctgggc
tggggaggagccgactgcagcacccctctatgtccccaggcctgcatcctgcacggcacc
tgtgacaagagaggagagcgttgtctatgcagctcggacttcctgggccagaactgtcag
ctgggtctccgtgatgacagtggtgtggggcagtggtggcaggtgagtgggggcgaccct
tacacgcccccccggaccggctctgctggggtctacctgtcctccattggagccatgtac
ctgtttggagggtttgacctgaaccgagctttgggagacctggttaaatacaacttcagc
ttgaaccaatgggagaacagatcttatggacactccccagtggctcgtcactcccacacg
gcagtagagtggaaggggaacatggtgatcttcggaggagagctcatgagcggcgcttta
gccagcgacgtctggatgtaccgtccaatccaggaggactggcagcagctcggccaatcc
cattcgcccggggcaccgagggtggccaaccatgcagcatctgtagtggacaactatctc
tacatatttggaggtcgtacggaagaggatatgttctcatcatctttgtatcggtttgat
ctgcgggagtctggggtgtgggaagcggtgcagcccactggggggaagccccccgccaca
gcaggccactccatggtgtttcaccccccgtcccgggcactgctggtttacgggggccac
aggcctaccaccgccaggttcagtgtacgtgtgaactccacggatgtattccacgtggac
cagaggttttggacctcgttccgctcccgtttcccagccacaggccccagggagagagcc
ttccactcagccaccatcatcggcaactacatggtggtctatggggggaatgtgcacatc
cactaccaggaagagaagtgttatgatgaggaaatcttcttctaccacctggggtgtcac
cagtgggtgtcagctgggtcgagcctccaacacagaggagagtctgtgagagggcggtac
tcccatgtagctgctgtgatggagggcagggtgctgctggttgctgggggttacagtggt
attgcccgtggagacctggtggcatacaaagttccgctgtttgtgagcagcgacccagga
gaccgggtgagtcaagaagatgctgtgtgtgccgaggcaccagacgagagcatgtgtctg
aagaacccagaatgcagctggtgtgagggccgctgtcgggagtaccaacccaccaacccg
tgtggcagcacagggtgcctgggcctggcccgctttctgtctgactgccagtcctgcctg
gtgttcagtggggctccaggttccctgccccgtgcccccggtgacttcggctggtgtgtc
cagaacgagtcctgcctacctgtgtcagatcaaagtgcttgccgtgtggaccagatctca
ggggcgtatggctggtggggggagcgtacccgtttcctcaccacactcctttcctgtcgc
actgagaactatgtcccgggactgcacctgctcaccttccagcacccccgcaatgactcc
cagcctgacaaggtgtccatcctgcgcagcacctccatcatcctcagccccaccacagag
atggacgtcaccttgcagttccggggtttcatccaccccctgtggggtgcccctccacct
gcaccccctcccaccgagacagtctccatgtgggcccggatacagaggctacactttgag
gcccgcatggccgctggacccaactccctgcaactgaaggaggtggtaggtcgctgggca
gctcaccaggagaaggagacgaagctgctgtcccgtcctgacatgggtcgtctgtttccc
aacctgacccgggggaaccgctacctggtccaggccgagggatacctcaacaactcaggc
tctggacagaccagtgagatggccctgacctggaacagaactgccctgcccggcggaagt
gagatttccttcctgttcttggagccgtaccgttctggctcttgctcggggtaccagtct
tgcttggcgtgtctgtcagaccagtcctgtggctggtgcccgtctctgggccgctgtctg
ttccgtgccctacctgccctggagccctgcccagaggaccaggggggaggggaatgccac
ctgctgctggcccctccacaatgcaccctctgtgaggagtacagggactgctccgcctgc
actcaggaccactactgtgagtggcagatcaacgccagcaagaagggtgattaccaatgc
agccgacgggggaaactggatggatcaattcgcgacccaggggggtgccctaaagtctgc
aaccagaggaggacgtgtggagagtgtctgtctaactccagtcagtgtgcgtggtgtgag
tcggcccaggcctgcttctacttcgctgcctacctcaccaagtatccctacggagagtgc
agggactggtatgacagtgttcactcagtgccccagtgtaagcagtgctcagctctggtc
acctgtacagactgtctccagacgtttcagtgcggctggtgtggagactacaacaacccc
accatcggcaggtgtctacgaggagactggggagggatggacgacgcctctgtgtataac
tgcagtgtggctgtggatgaagtacgggctaccagtcctgagccccagaccttggccccc
ccgcggcccatggagctggagcacttggaggagggggagagggacccagtctggtcctac
cccagctgtcccgatgtggaggagtgcaggctgggcctccacagctgccaccccttcgcc
acctgcgtcaacacccccacctcctttgagtgccactgtgagaggggctacaccggggac
ggcatcctgcactgcaaccagacttgttataatgagtgtcgtgagggccagtgcagcggc
agcccgcggttcgagtgtgagtgttccctgggctggacatctgacccagccacactggtg
ctgagcggtgtggagtgtgacgtggactgtggctgtaacttccacagcacctgtatcacc
gccccaggcatctgtgaccactgccaggattggacaatgggtctccagtgtgagcactgt
cgaccagggagttttggttctgcgctggccgggggcgggggctgtgtgccctgccagtgt
aacggccatggaggccccctcctgggctactgccacaatcagacaggccaatgctactgc
acacaccacacccagggaccacactgtgaatcgtgcttgcctggatactacggagacccc
aggaataatggcacctgtttccgtcagtgtcaggggcgctctgtgatcctgtcccaccag
tcacccctctctgagctacccatctcgtcctccctggggtggcgagggggcgtcgggggg
aaggggggactctcccactgtctgtgggtcctgtctgtctctgagaacttggtcccctgt
gtgccgggcaagctgtgccctcctgtggctctcaccctgcacccagactcctacacacag
tgcactagctcctacgtttacgtgtttgacggcctgcctcgtttcttgagcaacggggtg
gtgcactcggaccacaacctgattggcgcattctgtgggacgacccggactcagccaatc
actgtggaggccacttcaggtgtgatctctgtgtactttgaggccaacgtctcgtccgac
cgccctctgggtttcaacgcctccttctgggtgcggcgctgtcgccagggttctgaggcg
ggggaggatgggtcacccgtatgccagggaggggcgcagtgcagcagggggctgtgccag
tgtactcaggggtatgggggaccgtactgcgacaggcccctctgtcccgagggctgtggg
ctagcagagggccgaggctcctgtaacttgtctctgggagtgtgtgtgtgtgcagacggt
tggggcggctctgactgctccacccctctggactccagcagcctagtttgggaaacccta
ctggacacacagctcacagcgaaccaggcccacaggttcctccaccggatgggccattct
ctagtgtctggaccccaggggaacctctggatgtatggaggcctttctctctcagagggc
atcctgggaaacatctacaggtactctgtgttggagcgccgctggactcagatgctgacc
agctcagtggaggaaggctccacccccagcccccgctaccaccacgcctctgcccttctg
gccagtcacgagcctctctccggcggccaaggagctactcacaacctcatgctggtggtg
ggcggtgtcacgcagaagggtgtcgccgtggatacgtggagcctcaacctcagcagtctg
gtgtggcgacagcacaagagctcagtgctgccaccggtggcaggtcatactctaacggtg
cgtcgggactcctctatgctgctcatcggaggttactctccagagaacggcttcaaccat
cacctgctggagttcaacatccactctggcaactggaccgtcgccccccacaccggcaca
cctcctacaggtctgtatggccactcggctgtgtaccacgagcagacggacgccgtgtac
gtgttcggaggctaccgcttccacgtggagacagtggagccctcaggagagctctacagt
ctctattatgccaacctcacctggtccctactggtcccctcacaggggaataagcccctg
tcccgtttcttccacgctgcagccctgataaaagacaccatggtgattgtgggagggagg
acaggagtggaggactacagcaacacggtgtatctgtaccagatcaactgtaacacatgg
atacagccagactcggcggtgggcgagccggttaaccgttcagtgtctctggccatggtg
ggctggggtgggcggctgttcctctctggggggttcaacggggtcaccctggggcgtctt
ctcaccctgacccttccctctgacccctgtgccttgctgcccacgcccgaggcctgcaac
accaccacaggcagctgtgtctggtgcaggggcacctgcgccgcctctgatactgctgag
agactgggctgttccattggtcagtctccctgctcccccacccctcgtctaccagaccag
tgtcgcagactaaagacctgcagtgagtgtctggcacgccaccccaggaccttctctagc
ccctcacagtcccagtctgctctgcagtgtaagtggtgcaccaactgtccagagggagca
tgcatcagcagtacagttagctgcacctcagaacacgactgcaggatcaaccagagagag
atcttcctgtccagcaactgtactgagaccagctgtgaggcctccgactgccccaagtgc
accgcctccgggaagtgcatgtggacacgccagttcaaacgcaccggcgagaccaggcgc
atcctgagtgtgaaccccacctacgactggacgtgcttcagctacgccctgctcaacgtg
tcccccatgcaggtggagtcctccccccctctgccctgcccgcccccctgccaccacctc
agcacctgcaacctctgcctgggctcccggggctcagacgggggctggcagcactgtgtg
tggagcatggcactgcagcagtgtgtgagtccatccttcgtgcctctgcgctgtgaggcg
ggtcagtgtggtcgtctgctgtctggtggggactcttgctccccccagtgcgctcagctc
acccagtgctctcagtgcatcgcctgtccccagtgtggctggtgtgctgcccgggggggc
aacggggctggacgctgccagcagggaggcctcaatggtgtgagtgagggagtgtgtccc
cagggaaacagcagctggtccttcctccactgcccagaggaggatgagtgtgccaacggc
caccaccactgtaacgtcacccaggactgccatgacctgacccagggataccactgcacc
tgtaagcagggctacgttctcagccgtgtgtcaggtcagtgtgagccggtctgtgctcag
ggctgtgtcaacgggacctgtgtgtccccgggagtgtgtcagtgtcactttggctttgtg
ggggacaactgctcgtctcagtgtcgttgtaacaaacacagcaactgtaaaggagtgtct
gagcctgacaagtgtctggagtgtaaaaacaacactatgggtgatcactgtgagaagtgt
aagcccctgtatgtggggttggcggtgggcggggggacgtgtcgcccctgtcgggagttc
tgcagggggaacagtgcagtgtgtttgtcccgggacgaacacaagagggcgctagaccac
ccccaagaccaccctctggacccagacagcattgttcagtgggtgtcggaaggtcctaca
gaggactcagcggtttgtgtgagctgccagaacaacagcgtgggggacaagtgtgagagc
tgcctcagtggctacttcctactgcaggggaactgtgacaagtgtcagtgtaacggccat
gcagacacgtgtaatgaacatgacggcacaggctgcccatgtcagaacaacacagagacc
tcttcctgcctcagcagcccgcagagcgacaggaaggactgctacagaacacagtgcgcc
aagtgcaaagactccttcaatggcacaccggtaaacgggcgccagtgctaccgccagttc
aacgtggacaatgagtgctgcttcgaccccacctctcagacaaactgcttccacgacccc
accatccgcaatttgcccaagggacgcactgtcttcttcgctgcccagccaaagtttacc
aacgtggacatccgggtcaccatcgacgtgaccttcggggaggtggaggtgtacgtgtcc
aactcccatgacaccttcatcgtagaagtggacctccacacaggcatccatgccatcaag
atcgaggacgagtcggtggcccgaggtggggcgagcggaggggataaggagacacctccg
tcacctatgaaagtgtatgccaactcctcatccagcctgggtggggccatgctccccaac
acccccctgcagctccacgccaagcccccgggggcagacagggaggtacgggaggccaag
acggaggggctcatctcctatatcacggtgtggaagccccagacggtgctgattgttcga
ggtgtccgtgaccgcgtggtcatcaccttcccccatgaggtccactccctgaagtccagc
cgcttctacatcgccctgcgcggggtaggcgccgaggagagactgggcgagtcccagggc
ctgctcttccttcgccaggaccaggctcacatcgacctgttcgtcttcttctctgttttc
ttctcctgcttcttcctcttcctctccgtctgcgtcctcctctggaagatcaagcagttc
atggacttccgccgagagcagaggcgtcacatccaggaaatgaccaagatggcatccagg
cccttcgccaagctcactgtctatttggagccagaggagccccagctcatctacctgccc
gccacagggggcggaggggtggggggcagtgccgtgtccctggcccatgcacgcacagga
aagctggggggcattgtagttggccagagggggcgtgctggagccatctcctacaaacac
gagccaggctccggccccaccgtccaccaccaccttaccctgggtggagggggcaacagt
gggcaacacctgcccctgcattacctcaacacccaccactatgtccccaccaacaccacg
gcctcgcacccccaccaccacccatcgtcccacagcggctaccagcacttctgccgctcc
gaccctttcttgtcccagctcatgggcttctcctactccaccttcaaggtggggcccatc
accctggagcccacggacgacggcatggccggggtggccaccgtcctcatccagctgccg
gggggcatcctggcccctaaccgcgcctgcctggggtccgccctggtcacactacggcaa
aacctccaggagtactgtggtcacggcaatggagggggacatcccggggtgggagggggg
cgcaaaggcctgctagggcatcagcacctcaccaccatggctatgtag
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integrated database retrieval system
