Oncorhynchus tshawytscha (Chinook salmon): 112222755
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Entry
112222755 CDS
T05605
Symbol
smg9
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112222755 (smg9)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
112222755 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_16
ABC_tran
AAA_30
DUF6079
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
112222755
NCBI-ProteinID:
XP_024241263
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All DBs
Position
LG23:complement(21764263..21772726)
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AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRDRDVGPPGQNLSGPSRDREYVPRERRDGSEEPPGPLLQ
KTPIILAKPPGERSKPSQSVPTSGGQALEKPIMLIKSREDGGKPGTPPEVASPASGSGAS
KLEREGQRPTQPVYQIQNRGMGAAASSGAVDPVIGQTKLVPPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANAPEEDQRGYVFRAQTQEIKERGGNQ
STGIDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQITAFLF
TVCHVVIVIQDWFTDINLYRFLQTAEMLKPSTPSASHDSTGSSGNEEGSEYYPHIVFLQN
KSSRDEFCPRNLKKMHMAVDKLMAHSHLKYKGTLSMLDCNIFPGLDRDYLETEVNMFLLP
LMENEGEDALTKAGSGSAPLFSLLPGYRGHPTFSSQVSKLRSQILAMSRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctggccacagtcaacctggcatgtacggacagggaaggaggagaaggcga
cgccgagacagggatgtgggtcccccggggcaaaacctctctggtcccagtcgagatcgg
gaatatgtccccagagaacgcagggatggcagtgaggagcctccaggaccactccttcag
aagacccccatcatcctggccaaacccccaggagaacggtccaagccttcccagagtgta
cccaccagtggaggccaggccctggagaagcccatcatgctcatcaagtccagggaggac
ggggggaaaccagggacccctcctgaggtggcttctccggcctctggctctggggcctca
aagctagagagggagggccagcgccctacccaacctgtctaccagatccaaaacagaggc
atgggagcagctgcttccagcggtgctgtcgaccctgtgattggccagaccaagctcgtc
ccccctgagaagatgaagcacagcatcaagctggtggacgatcagatgaactggtgtgac
agcgccatggagtacctaagggaccagacagacatgttggtagtgggagtcattggcctg
cagggaacagggaaatccaccatcatgtctctcctgtctgccaacgcacctgaagaagac
caaaggggctatgtgttcagggctcagactcaggagattaaagagagaggagggaaccag
agcactggtattgacttctacattacccaggaaagagtcatcttcttggacacacagccc
attctcagcccctccattttggatcacctcatcaacaacgaccgcaagctgcctccagag
tacaacctccctcacacctatgtggagatgcagtctcttcagatcactgccttcctgttc
acagtgtgccacgtggtcattgtgattcaagactggttcactgacatcaacctctacagg
ttcctccagacagcagagatgttgaagccctccaccccctcagccagccacgacagcact
ggttcttctggcaacgaagagggatcagagtactaccctcacatagtgttcctgcagaac
aaatctagtcgtgatgagttctgtcccagaaacctgaagaagatgcatatggcagtggac
aagctgatggcccactcccatctgaaatacaaaggcactttgtccatgctggactgtaat
attttccctggcctggaccgcgactacctggaaacagaggtcaacatgttcctgctgccc
ctcatggagaatgagggggaggacgctctaaccaaagcagggtctgggtccgcccctctc
ttctctctcctcccgggctacagaggacaccccaccttctcctctcaggtctccaagctc
cgcagccaaatcctggccatgtcccgctgtcagctgtcacacaccatcctcacagagaag
aactggtttcactatgcagctcgcatctgggacggggtgaagaagtcctcagccctgtct
gaatacagccgtctacaggcctag
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