Oncorhynchus tshawytscha (Chinook salmon): 112222780
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Entry
112222780 CDS
T05605
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112222780 (ascc3)
Enzymes [BR:
otw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112222780 (ascc3)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
112222780 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
112222780
NCBI-ProteinID:
XP_024241293
LinkDB
All DBs
Position
LG23:complement(19546270..19692554)
Genome browser
AA seq
2209 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGIEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLGESQVEEFVRSQSSCRAPQRGSAFGRNITFSYDCYTLDP
QEALPWVGDPEDETPGGGLDFHSFLNNHQGRRGNGGEVDGGRLSPGGAQSSGDGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQRRSS
IVDSLLSIPADRINYPPDGSRGGEGGSKPTYGCQVTIQSGKEKEMMKMHRREEKRERKRG
ERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAEATK
TSAFVGGAKLMLPEGIKRENNKMYEEVEIPPSDPMSIGFEEKPIYISELDEIGQLVFKGM
QRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKI
VYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTR
KSVGDVALSQIVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPN
YLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKTTNKIQQLHDMEEVCYEKVLEQIR
NGHQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQMKE
MFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQIYDA
KRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQFLET
MADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYRKEL
VVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFNSQKTEADILS
IVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEVDSF
SLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQFSIL
PHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSILMEATIQPITR
TVLRVRLQITPDFQWHDQCHGSVGEPWWLWVEDPINDHIYHSEYLLLQKKQVVSGEPQQV
VFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPITAL
GNLEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQYPTS
KVVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEKWDG
VSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTNKTVRVVGLSTAL
ANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRSHS
PAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQMTDIIAMVRESNLKLTLA
FGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGKTR
RYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSD
HLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETINKYLSNLVERSLR
DLECSYCMEIGEDDCTIEALTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLTDAE
EYAELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYGTDT
KTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQHLY
LFSRWSSKGGKGGARGFHGPIEGLPELIATCEGRENTFAAIVGEELQPHQISQAWSFLSH
LPVVEVRLSVKGWWEGCGEQTERPLPAAGGKLRDDRSWLDVHADQEYVLQVSLQRINTGQ
QRRKQDTKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYCRHRSTISLAFYTPVKTG
KCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGMSVK
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgccctgcgctccttctctactgtcagcaagcaggaa
gacttcacagaagaagtatatgatctgaagaccaagcgtctgaagaggcaggagctgttc
tccagagagggcctgacatggcagaagatagtccagttcttcactcagcacctggagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaagcagata
gtggggatagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagacg
ttccacaacaaggaccatgtgggtcacgaggagacgagggccatcaagcaaatgtttggg
cccttcccctcctcggcagctgacgcctcctgtgctgctgtgtcccgggctgtggcccct
ctgggagagtcccaggtggaggagtttgttcgttcccagagctcctgtcgcgcccctcag
cgaggctcggcctttggacgcaacatcaccttctcctatgactgttacaccctggacccc
caggaggccctaccctgggtgggggaccctgaggacgagacacctggaggaggcctggac
ttccacagcttcctcaacaaccaccaaggtcgcaggggtaatgggggagaggtggatgga
ggcaggctaagcccgggaggggctcagagctctggggatgggaccatcctgagaggggag
gtggagaagtacctgaacggaggcaacatgatctcctccagccctgaggaactgtgcacc
tccctgtttgagatgctggcctccaccaagagtgacgacgagctgcaaaatgagctgttt
gagctgctgggcccagagggatttgagatgatctctgttctcctccagagaaggtcttct
atcgtggactctctcctttccatccctgcagacaggatcaactacccaccagatggtagc
cgtggaggagaggggggcagcaagcccacatatggctgtcaggtgaccatccagtcgggg
aaggagaaagagatgatgaagatgcaccggagggaggagaagagggagaggaagaggggg
gagagacgttgggatgacaccgaatcctcttccgacctctactttgaccccaaggagatg
agagctcagagagagcaggccctgctgacagcacggcggtctccagtgctgagcagagag
cgggtgtacgaacgcatccgctaccccaacgtctatgactgctacgccgaggccaccaag
acctctgcctttgtagggggagccaagctgatgttaccagaggggataaagagagagaat
aataagatgtatgaagaggtggagattcctcctagtgatcccatgtccatcggctttgag
gagaaacccatctacatctctgaactggacgagattggtcagttggtgtttaaggggatg
cagcgtctgaacaggatccagtccatagtgtttgagacagcctacaacaccaatgagaac
ctgctcatctgtgcccccaccggggccggcaagaccaacatcgccatgctgacagtcctc
catgagatcagacagcacctccaacctggaggggtcatcaagaaggatgagttcaagata
gtgtatgtagctcctatgaaggccttggcagcagagatgacgaactacttcagtaagcgg
ttggagccactgggcattgctgtcaaagagctcactggagacatgcagctaaccaaaggg
gagatcctgcgtacacagatgctggtgaccacccctgagaagtgggacgtggtgaccagg
aagagcgttggagacgtggccctgtcccagattgtaaagctcctcatcctggacgaggtg
catctgctacacgaggacagaggaccagttctggagagcctggtggccaggacactacga
caggtggagtcaacccagagtatgatccgtatcctgggtctgtcggccacgctgcccaac
tacctggacgtggcctccttcctccacgtcaacccctacatcggactcttctacttcgac
agccgcttcagacccgtgcccctcggacagagcttcgtcggcatcaagaccaccaacaag
atccagcagcttcatgatatggaggaggtttgctatgagaaggttctggagcagatcaga
aatggacatcaggtgatggtgtttgtccacgctcgtaatgccacggtgaggacagccatg
gggctgatcgagatggctaagaaccggggagagtcttccttcttccagccagaccatgga
cctgactacggccagtgtgagaaatcaatccagcgttccaggaacaagcagatgaaggag
atgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgaccgtagcctg
atggagagcatgttctccaggggttacctcaaggttctgtgctgtactgccacactggcc
tggggagtcaacctgcctgcacacgctgtcatcatcaagggcacccaaatctacgatgct
aagcgtggtaccctggtggacctgggcatcctggatgtgatgcagatcttcgggcgtgcc
gggcggcctcagtttgacaagtatggcgagggcaccatcatcacggcacatgacaagctg
agccactacctcaccctgctcacccagcagaaccccatagagagccagttcctagagacc
atggctgacaacctcaacgctgaggtatcactagggactgtgactaacgtggaggaagca
gtgaggtggctgagttacacctacctgtacatccgcatgagagccaaccctctggcctac
gggatcaaccacaaggcctaccagatggacccaggtctggagctgtatcgtaaggaactg
gtggtgatggcagccaggaagctggacaaggccaggatgatccgcttcgaggagaggaca
ggatacttcgcctccactgacctgggcagaaccgccagtcacttctacatcaaatacaac
accatggagacattcaacgagcttttcaactcccagaagacagaggctgacatcctcagc
atcgtctccaaggccgaggagtttgaacaggtcaaggtgcgtgatgaggagatggaggaa
ctagaacagatgctgtgtaactactgtgagctgcctgctgcaggcggagtggagaacgga
tacggcaagatcaacatcctactgcagacctacatcggccggggagaggtggacagcttc
tccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtcagggctctg
tttgagattgctctgaggaagcgctggcctgccatgacctaccgcctgctcaacctgtgt
aaagtgatagacaagcgtctgtggggcttcgctcatcccctgagacagttctccatcctg
cctcacaacgtgctggcccgtctggaggagaagaaactcactgtggacaaactgaaagat
atgcagaaggacgagataggtcacatgcttcaccacgtgaacattgggttgaaggtgaag
cagtgtgtccaccagatcccttccatactgatggaggccaccatccaaccaatcacacgc
accgtgctcagggtccgcctccagatcacccccgacttccagtggcacgaccagtgtcat
ggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgatcacatctac
cattcagagtacctgctcctacagaagaaacaagtggtgagtggggagccccaacaggtg
gtatttaccatccctatctttgagcccatgccctcccagtactacatcagagctgtgtca
gaccgctggctgggctcagaggctgtctgcattatcaacttccaacacctcatcctgcct
gaaagacatcccccacatactgagctgctggacctgcagccgttgcccatcaccgccctg
gggaacctggagtatgagagtctgtacaagttcacccacttcaatcccatccagacacag
atcttccacacgctctaccacaccgacaccaacgtcctgctgggggcgccaacgggctcc
ggtaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtaccctacctcc
aaggtggtgtacattgcccccctgaaagctctggtcagggagaggattgaggactggaag
atcaggatagaggaaaaactggggaagaaggttgtggagctgacaggtgatgtgactcca
gacatgcgggccatcgccgcggccgacctgatcgtgaccaccccggagaagtgggacggc
gtgagtcgctcctggcagaaccgcagctacgtccagaaagtagccatcctcatcatcgac
gagatccacctgctaggggaggacagaggtcctgtgctggaggtcatagtgtccaggacc
aacttcatctcctcccacaccaacaaaactgtccgcgtggtgggcctgtccacggccctg
gccaacgcacgagacctcgccgactggctagggattggacaggtgggtttgtttaacttc
cgtccctctgtgcgtcccgtcccattggaggttcacatccaaggcttcccaggacagcac
tactgcccccgcatggccagcatgaacaagcctgtgttccaagcgattcgcagtcactct
ccagccaagcctgttctgatctttgtgtcatcgcggcgacagactcgtctgacggctcta
gacctgatagccttcctggccaccgaggacgaccctaaacagtggctgcaccaggacgag
actcagatgacagacatcatcgccatggtgagggagtccaacctgaagctgacgttggcg
tttggcatcggcatgcaccacgctggactacacgagcgagacaggaagactgtggaggaa
ctgtttgtcaactgcaagatccagatactgatagccaccagtactctggcctggggagtc
aacttccctgcccatctggtcattgtcaaaggtactgagtactacgatgggaagaccaga
cgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgcaggccgccct
cagtatgacgaccagggcaaagctgtgatcctggtccacgacatcaagaaagacttctac
aagaagttcctctatgaacccttccctgttgagtccagtctcctgggtgtcctgtcagac
catctgaatgctgagatcgctgcagggaccatcacctctaaacaggatgctatggactat
atcacctggacgtacttcttccgcaggctggtcatgaaccccagttactacagcctggat
gacatcagccacgagaccatcaacaagtacctgtccaacctggtggagaggagtctccga
gacctggagtgttcctactgtatggagataggagaggatgattgcaccattgaggcccta
acgtacggccgtatctcctcctactactacctgaagcaccagacagtcaggatgttcaag
gagaggctgagggctgagctgcccatccaggacatcctctctgtcctcacggatgctgag
gagtacgcggagctgcccgtcaggcacaacgaggaccagctgaacagtgagctggctcag
cgtctccccctgcaggtcaacccccacagctatgacagcgcccacaccaagacccacctg
ctgctgcaggcccatttcagccgcgcccagctgccctgctccgactacggcaccgacacc
aagaccgtgctggacaacgccatacgcatctgtcaggccatgctggatgtagcagccaat
gagggctggctggtgactgctctcagcatctgtaacctggtgcagatgatcgttcagggc
aggtggctcaatgactcctctatactgaccctacctaccatagagcagcagcacctctac
ctgttcagcaggtggagctccaagggagggaagggcggggccaggggcttccacggacca
atagaagggctccctgagctgattgccacctgtgaggggcgggagaacaccttcgctgcc
atcgtaggagaggagcttcagccccatcagatctcccaggcctggtcgttcctcagccat
ctgccggtggtggaggtgcgtctgagtgtgaagggttggtgggaggggtgtggggagcag
acagagcgccccctccctgcggccggggggaagctcagggatgacagaagctggctggac
gtccacgctgaccaggagtacgtcctgcaggtctcactgcagcgcatcaacaccggccag
cagaggaggaagcaggacactaaggcccaggcccccaggttccccaagaataaggatgag
ggctggtttctggttctaggagaggtggagcgcagagagctactggccgtcaaacgcatc
ggatactgccgacaccgcagcaccatttccctggccttctacactcccgtgaagaccgga
aagtgtatttacacgctatacttgatgagtgacagttacctgggtctggaccagcagtat
gacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaagtcact
gaggccatgggaggcatgtccgtcaagtga
DBGET
integrated database retrieval system
