Oncorhynchus tshawytscha (Chinook salmon): 112222787
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Entry
112222787 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X18
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112222787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112222787
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112222787
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112222787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
112222787
NCBI-ProteinID:
XP_024241316
LinkDB
All DBs
Position
LG23:17494076..17537242
Genome browser
AA seq
2869 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNFNSHPHLNLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELTKPDGNDGSKLSGSGSGTGRSSRPGRTSDPPWFLSGSDT
LGRLAGNTLGSRWSSGVNGGSGGGGGGGGGGGGSSSSVGGAGGGGVGGAVSGGGGGGGSS
GRSSTAARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSV
IIRELQRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVI
IDADAMFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLD
GASFDTERGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGSLFSELVAV
SSKGELYQWKWSEPEPYRNTQNPSIRHPRVSFLGLTNEKITLLSANSIRATVATETNKVA
TWMDDTLSSVASKLEHSAQAYPELQGERIVSLHCCALYTCAQLESSLYWWGVVPFSQRKK
MLEKARAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGLLLES
VWNMNDSCRFQLRSPESLKNMDKTIKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIA
SSASLPYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPG
TSSSVSTQPSQTSAPAPITDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKL
CIPEKAEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSEHN
VAIFTAGQDSPVILRDGNGTIYPMAKDCMGGIRDPEWLDLPPIASLGMGVHSLANLPTNS
TIKKKAAIIILAVEKQTLMQHVLRCDFDACRQYLVNLEQAVLLEQSPHVLHSFLGHRCDG
NRNILHACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRT
GSSSSRGLRLREMMRRSLRAAGLGRHESGPSSDHQDPVSPPIAPPSWVPDPPPMDPDGDI
DFILAPAVGSLTTASTGTSQGPSTSTIPGPSSEPSVVESKDRKANAHLILKLMCDSMVLR
PHLRELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPGMTEKVEADSVFME
MICPTGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCH
KGHDCKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTSPNSRGEHIL
LFLVQTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDW
NALKSMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDIT
FIDTLLGTLVKELQNKYTPGRREEAVVVTRRFLRSVARVFVILSVEMASSKKKNNFIPQP
IGKCRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSV
EPLPPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVE
GVAGEEDHHEDQEEQGEENAEAEGQHDEHDEDGSDMELDLLAAAETESDSESNHSNQDNA
SGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETFLLDEPLE
RTTTASHVNSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAASSTGLIYIDPSNLRRSS
AISTSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHLVYSQYPAA
VKLTYQDAVNLQNFVEEKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHPSHPLHASQ
HSARRERMTAREEASLRTLEGRRRAATLLTVRQGMMSARGDFLNYALSLMRSHNDEHSDV
LPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTTQMDRKRSREILELGLDNEDSEHEND
EDTNQSSTLQDKEDDTVPAEMGQNHPFFRRSDSMTFLGCIPPNPFEVPLAEAIPLADQPH
LLQPNARKEDLFGRPSQGLYASSYTASKGLAEATLDRSCMEVNMGSSQILPTKMSYSANL
KNVMSMETSQRGREDQPMDQELVAPKPGPSPHDLAAQLKSSLLAEIGLTESDGPPLPSFR
PHCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEVKESKFRREME
KLRNLQSRDLALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKVTFKDEPGEGSG
VARSFYTAIALAFLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSSMTLNLMQRLRNRDRE
RERRSGGLRAGSRRDRDRDSRRQLSIDTRPFRPASEGNPSDEPDPLPAHRQALGERLYPR
VHAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDL
GLLEAPEKAQQQENRKRHGSTRSVVDMELDDPEDGDDNAPLFYQPGKRGFYSPRPGKNTE
ARLNCFRNIGRILGLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLI
RHSQAGEADAVFAAMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVRKYAEHRM
LVVAEQPLHAMRKGLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGTK
TLARIHKESQRENADKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMP
SITIRPPDDQHLPTANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8610 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatacacttcgtggttcacccgttgcccgggactgaggaccagctcaatgac
agacttcgtgaagtgtcggagaaactcaacaaatacaactttaacagtcatccacacctc
aacctgctggagcaggccaccttaaaacagtgtgtagttggaccaaaccatgctggcttt
ctgcttgaggatggacgtgtgtgtcggatcagctttgctgtccagcctgatcgtttggag
ctgaccaaaccagacggcaacgatggttcaaagttgagtggcagtggttcagggacagga
aggagctccaggccaggcaggactagtgatcctccctggttcctgtctggctctgacaca
ctgggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggtgga
tcaggtggaggaggaggaggtggtggtggtggcggtggcagcagcagcagtgtaggaggt
gcagggggaggaggtgtaggaggagctgtcagtggaggtggtggtggtggaggctcctct
gggaggtcgtctacagctgccagggactcgagacgtcagaccagggtgatccgcacaggg
agggaccggggctctggtctcctgggcagccagccccagcctgtcatccctgcctcggtc
atcccagaggaactcatctcccaggctcaggtggtccttcaggggaagtctaggagtgtg
atcatccgggagctccagaggaccaacctggatgtcaacctggccgtcaacaacctactg
agcagagacgatgaggacggtgacgatggcgatgacacagccagcgagtcctacctccct
ggagaggacctgatgtccctgctggacgctgacatccactcagcccaccccagtgtcatc
atcgatgctgacgccatgttctctgaggacatcagctactttggctacccctccttcaga
cgctcctccctgtcccgtctgggctcctcgcgagttctccttcttcccttagagcgtgac
tcagagctgttgcgtgagcgtgagtctgtgttgaggttgcgggagcggaggtggctggat
ggggcctcatttgacacagagaggggctccaccagccgcgagggggagcccagcctggac
aagaagaacatccccgtccagagccctgtctctctgggcgaggagctgcagtggtggcct
gacaaggatggtgtaaagtttgtgagtatcgggtccttgttctctgagctggtggcagtg
agctctaagggggaactctaccagtggaagtggagtgaaccagaaccatacagaaacaca
cagaacccttctatccgccacccccgagtgtccttcctgggcctgaccaatgagaagatc
accctgctgtctgctaacagcatcagagccaccgtggccacggagaccaataaggtggcg
acctggatggatgacaccttgagcagcgtggcgtccaagctggagcacagtgcccaggcc
taccctgagctgcagggggagcgcattgtgtctttgcactgctgtgccctctacacctgc
gcccagttggagagcagcctgtactggtggggtgttgtgccttttagtcaacggaaaaag
atgcttgaaaaggctagagccaagaacaagaagccaaagtcgagtgccggcatctcctca
atacccaacatcaccgtgggaacgcaggtgtgcctgaggaataaccccctctaccacgcc
ggtgccgttgccttttctgtcaacgctgggatccccaaggtgggactgctccttgagtct
gtctggaacatgaacgacagctgcaggttccagctgcgatcaccagagagcctcaagaac
atggacaagaccatcaagacacaggagatcaaaacggagagcaagccggagttggtaaag
actgagatgggcccccctccttccccggcctccacctgcagtgacacctcctccatcgct
agcagtgcctcgctgccctacaaacgaagacgctcgaccccggctcccaaagaggaggag
aaggtgaacgaggagcaatggcctcttcgggaagtggtgtttgtggaggatgttaaaaac
gtccctgtgggaaaggtgctgaaagtggacggtgcgtatgtagctgtgaagtttccaggg
acgtcaagcagcgtgagcacacagccgagtcagactagtgctccagctcccatcactgac
tctgacccctcctcactgctgcaggactgtaggctgctcagaatagacgagttacaggtg
gtaaaaactggtggaactcctaaagttccagattgcttccagcgtacacctaaaaaactc
tgcatcccagagaaggctgagattctggctgtgaatgttgactccaaaggagttcacgca
gtgctgaagactggtaactgggtgaggtactgtatctttgacctggccacaggcaaagca
gagcaggagaataacttccccaccagtaacctggccttcctggggcagagtgaacacaat
gtagcgatcttcaccgcaggacaggactctccagtcatccttcgggatggaaacggcaca
atttacccaatggccaaagactgtatgggcgggatccgagaccctgagtggttggacctg
ccgcccatcgccagcctgggcatgggggtacactccttggccaacctccccaccaactca
accatcaagaagaaagctgctattatcatattagctgtggagaagcagacgttgatgcag
cacgtgctgcgttgtgactttgatgcctgtcgtcagtacctggtcaacctggagcaggct
gttctcctggagcagagtccccacgttctccactcctttctgggccaccgctgcgacggc
aaccgcaacatcctccacgcctgcgtctccgtctgcttccccgtcagcaacaaggagacc
aaggaggaggaagaagctgaacggtctgagaggaatacgtttgcagagagactgtcagca
gtggaggccatcgccaacgcaatctccgtggtgtctagcaacagctctgggaacaggacg
ggctcttctagcagcagagggctgcgtctgagggagatgatgaggcgctctctgagagca
gcggggcttggccgtcacgagtctggcccctccagcgaccaccaggaccctgtgtcccca
cctatcgcccctcccagctgggtgcctgacccccctcccatggacccagatggtgacata
gacttcatcctggcccctgcagtgggatctcttaccacagcctcaacagggaccagccag
ggccccagcacctccactataccaggcccctcctccgagccttcggtggtggagtctaaa
gaccgcaaggccaacgcccacctcatcctcaaactgatgtgtgacagcatggttctcagg
ccacacctccgcgagctgctatccgccaaggatgcccgtggaatgaccccattcatgctg
gcagtcagcgggagagcttacccagctgccattactgttctggaggctgctcagaaaatg
gccaaggtgggagaccccggcatgactgagaaggtggaagcagactctgtgttcatggag
atgatttgtcccacggggaccaaccctgacgactctcctctctacgtcctctgctgcaac
gacacctgcagcttcacctggacaggagctgaacacatcaaccaggatatctttgagtgc
cggacctgcggcctgttggagtctctctgctgctgcactgagtgcgccagggtgtgtcac
aaaggacatgactgcaaactcaagaggacctctcccactgcgtactgtgactgctgggag
aagtgtaagtgtaagacgctgatcgctggacagaaagctgctcgtctggacctgctgtac
agactgctcaccaccactaacctggtcaccagtccaaacagccggggggagcatatcctt
ctgttcctggtgcagactgttgctaggcagagtgtggagcactgccagtaccggccccct
cgcatcagagaggacaggaaccgcaaggctgccaatgctgaagactctgacatgccggac
catgacctggaacctccacgcttcgcccagctggccctggagagggtgctgcaggactgg
aatgctctcaagtccatgataatgttcggatcccaggagaataaagacccgttgagtgcc
agcagccgtatcgcccatctccttccggaggagcaggtgtacctgaaccagcagagtggc
accatccgcctggactgcttcacacactgcctcattgtcaagtgtgcccctgacattaca
tttattgacaccctgctggggaccttggtgaaggagctgcagaacaagtacactcctggc
cggagagaggaggccgtcgtcgtcaccaggaggttcctgcgctccgtggccagggtgttt
gtcatcctcagcgtcgagatggcttcgtccaaaaagaaaaataacttcatcccccagccc
attgggaagtgcaggcgtgtgttccaggccctgctgccctatgcggtggaggagctgtgc
aatgtggcggagtcgctcatcgtgcctgtgaggatgggcatcgcccggcccaccgccccc
ttcaccctggccagcaccagcatcgacgccgtgcagggcagcgaggaactcttctctgtg
gaacccttgccaccgagaccctccccagaccagtccagcaattctagtcagactgcatcg
tcctacatcatcaggaacccccagcctcgccgcagcagccagtcccagccggtcagaggg
cgagacgaggagcaggatgacattgtgtctgctgacgttgaagaggtagaggttgtcgag
ggtgttgctggggaggaggatcaccatgaagaccaagaggaacagggagaggagaatgct
gaggcagagggacagcatgatgaacatgatgaggatggaagcgacatggagttggatctg
ctggctgctgcggagacggagagtgacagcgagagtaaccatagcaaccaggacaatgcc
agcggtcggaggagtgttgtcaccgcagcaactgccggctccgaagcaggtgccagcagt
gtccctgccttcttttcagaggacgactcccagtccaacgactcgagcgactcggacagc
agcagcagccagagcgacgacgtggaccaggagaccttccttttggacgagcctttggag
aggaccaccaccgcctcgcacgtcaacagtgctgcccaggcgccacgctccatgcagtgg
gctgtacgcaacacccccagccagagagccacgggcagcgccccctccagctcctccacc
cccgctgcgagctccacaggtctgatctacatcgacccgtccaacctgcggcgcagcagt
gccatcagcactagcgcggccgctgcggctgcagctctggaggcctccaactcgtccagc
tacctgacgtcagcctccagcttagcccgggcctacagcatcgtcatcagacagatctct
gacctgatgagcctcatccccaagtacaaccatctggtctactcccagtaccctgctgca
gtcaaactcacctatcaggatgctgtcaacctgcagaactttgttgaggagaagctgatc
cctacgtggaactggatggtgtccatcatggactctacagaggctcagctgcgttacggc
tcagccctgtcctcagcaggcgaccccggacacccatcccaccccctccacgcctcgcag
cactccgcccgcagggagcgcatgacagcccgcgaggaagccagcctccgcaccttggag
ggacgcagacgtgctgccactctgctgacagtgcgtcaagggatgatgtcagcacgggga
gacttcctgaactacgccctgtctctgatgcgttcccataatgacgagcactctgacgtt
ctgcctgtgctggatgtgtgttctctcaaacacgtggcctacgtcttccaggccctcatc
tactggatcaaagccatgaaccagcagacaactttggacacaacgcagatggaccgcaag
aggagccgagagattctggaactgggactggacaatgaagattctgaacatgagaatgat
gaggacaccaatcaaagttccacgctccaggataaggaggatgacacggtccctgctgag
atgggacagaaccacccgttcttccggcgctctgactccatgaccttcttgggctgtatc
cctcccaacccctttgaggtccccctggctgaggccatccccctggcagaccagcctcac
cttttgcagcccaatgcaaggaaggaggatctgtttggccgtcctagtcagggcctgtac
gcgtcctcgtacacagcaagcaagggcctggccgaggccaccctggaccgcagctgcatg
gaggttaacatgggctcctctcagatcctacccactaagatgtcctactcagccaacttg
aagaacgtgatgagtatggagactagtcagcgcggccgagaggaccagcccatggaccag
gagctagtggctccaaagccaggcccctcaccccacgacctagccgcccagctgaagagc
agcctcctggctgaaataggcctcactgagagtgatggccccccgctcccttcctttaga
ccccactgtagtttcatggggatggtgatctcccatgacatgctgctgggccgctggcgt
ctgtctctggagctgttcgggcgcgtcttcatggaggatgttggagcagagcctggatcg
attctgactgagctggggggttttgaggtgaaggagtctaagttccgccgggagatggag
aaactccgtaacctccagtcccgtgacctggccctggaggtggaccgtgaccgtgaccag
ttgatccagcagaccatgaggcagctcaacacccactttggacggcgctgcaccaccaca
cccatggctgtgcaccgcgtcaaggtcaccttcaaggacgagccgggcgagggtagtggc
gtggcccgtagcttctacacggccatcgccctggccttcctgtccaatgacaagctgccc
aacctggactgtgtgcagagcgtcagcaagggcatgcaggccagcagtacgtgtcatcac
gattacaactcaagtatgacattgaatcttatgcagcggctgaggaacagagaccgggag
agggagcggaggagtggagggctccgagctggctctaggagagaccgagacagggactcg
aggagacagctgtccattgacacccggcccttcaggccagcctctgagggaaaccccagt
gatgaacctgaccccctgcctgcccacagacaggccctgggagagaggctgtacccccgc
gtccatgctatgcagccggcgtttgccagtaagatcactgggatgctgctggagctctcc
ccagcccagctgctgttgctcctggccagtgaggactctctcagggccagggtggaggag
gccatggagctgctcattgcacatggaagggaaaatggtgctgacagcatactggacctg
ggtctcctggaggctcctgagaaagcacagcagcaggagaaccgtaaacgtcatggctcc
acccgcagtgtggtggacatggagctggacgaccctgaagacggagatgacaacgctccc
ctgttctaccagcccgggaagagaggcttctattctccccggcccggcaagaacacggag
gccaggctcaactgcttcaggaacatcggcagaatactagggctgtgtctgctgcagaat
gagctctgtccaattactttgaacagacatgtcatcaaggtgctgctcggcagaaaggtg
aactggcatgactttgccttctttgacccggtaatgtacgagagcctgcggcagttgatc
cgtcactctcaggctggagaggcggacgctgtgtttgcagccatggacctggcctttgcc
atagacctgtgtaaggaggaaggggctggacaggtggagctgctgtcaggtggggtcaac
atgcctgtgactcctctcaacgtttacgaatatgtgagaaagtacgccgaacacaggatg
ctggtggttgccgagcaacctcttcatgcaatgaggaagggtctgttggatgtccttcct
aagaacgccctggaggacttgacagctgaggacttcaggctgctggtcaatggctgtgga
gaggtcaacgtgcagatgctcatcagcttcacttccttcaatgatgaatctggtacaaag
accttggcccgtattcacaaagaatctcagagggaaaatgctgataagttgttgcagttc
aaacgctggttttggtccattgtggagaagatgagcatgactgagaggcaagatctggtg
tacttctggacctccagtccgtctctgccagccagtgaggaaggtttccagcccatgccc
tccatcaccatcaggcctccggatgaccagcacctgcccacggccaacacctgcatctcg
cgtctctacgtgccactctactcctccaaacagattctaaaacagaaactcttacttgcc
attaagaccaagaactttggttttgtgtag
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integrated database retrieval system
