Oncorhynchus tshawytscha (Chinook salmon): 112222823
Help
Entry
112222823 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3 isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112222823
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112222823
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
112222823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
112222823
NCBI-ProteinID:
XP_024241383
LinkDB
All DBs
Position
LG23:complement(15262180..15313585)
Genome browser
AA seq
472 aa
AA seq
DB search
MGELNKEVVDLVWKRPGSNGVSASLFRRWTQGLVFSETEHTALEQFEGGPCAVIAPIQAF
LLKNILFNRESSNWRHITEEEQKAALCSTLAEILEQACSTSSTTSFCLVTWAKGQCPHTT
THTPLTGGPETSQTPQDQQPTALADEDLGFERFHSILQKRIVKSLSELREEVVSLYETWK
GRCGVLFFLYSVILTKGIVNIRNEIEDTTEPLVDPVYGHGSQSLVNLLVTGHAVSNVWDG
DRECSGMKLHGIHNQTSVGFLTLMESLRYCKVGAFLKSPKFPIWILGSETHLSVFFAKEM
CLVAPESPSEQARRVFQTFDPEDNGFIPDSLLEEVMKALDLVSEPEYYVSLMKSKLDPEG
LGIVLLAPFLLEFFPDQTGTLWQGTMAEEWESERQRERKDTGIPDSFPVYHYNGLKQSNH
NERVEYVQGTALVLGLEDPMVRTDDTPVKRCLQTKWPYIELLWNTDRSPSLN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttaaataaagaggttgtggatctagtttggaaaagaccaggcagtaacggg
gtgtctgcttcactcttccggagatggacccaagggttggttttcagtgagacagaacac
actgcactggagcagtttgaaggaggaccctgcgctgtcattgctcctatacaggccttc
cttctgaagaacatcttgtttaacagagagagttctaactggagacacatcacagaggag
gagcagaaagcggccctgtgttctactctggctgagatcctggaacaggcctgctctact
tcctccactacctccttctgcttggtgacctgggccaaaggacagtgcccccacactacc
actcatacacccctcacagggggtccagagaccagccagaccccacaagaccagcaaccc
actgctttggctgatgaggatcttggctttgagcggtttcacagcatcctccagaagcgt
attgtgaagtcattatcagagcttagagaggaggttgtgtctctctacgaaacctggaaa
gggcgctgtggagtcctgttcttcctctactctgtcatcctcaccaaggggatagttaac
atcaggaatgagattgaagatactacagagcctctcgtagatccagtctatggccacggc
agtcagagtctggttaacctgctagtgacgggccatgctgtctctaatgtgtgggatgga
gacagggagtgctctggcatgaagctccatggtatccacaaccagacatccgtgggcttc
ctcactctcatggagtcactacgctactgcaaggtgggtgcgttcctgaagtctcctaag
ttccctatatggatccttggcagtgagactcatctctcagtgttcttcgccaaggagatg
tgtctggtggctcctgagtctccatctgaacaggccaggagagtcttccaaaccttcgac
ccagaagataacggctttattccagactctctgttggaggaggtgatgaaggcactagac
cttgtatcagaacctgaatactatgtgagtctgatgaagagtaagttggatccagagggc
ttggggatcgtgctgctggctccgttcctcctggagttcttccctgatcagacagggact
ctgtggcagggaaccatggctgaagagtgggagagcgagaggcaaagagaaagaaaggat
actggaatcccagactccttccctgtctaccactacaatggcctgaaacagtccaaccac
aacgagagggtggagtatgtgcagggtacggccctggtcctgggcttggaggaccccatg
gtgaggacagatgacactccagtgaagcgctgcctccagaccaagtggccctacatagaa
ctgctgtggaatactgaccgctccccttcacttaactaa
DBGET
integrated database retrieval system
