Oncorhynchus tshawytscha (Chinook salmon): 112222826
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Entry
112222826 CDS
T05605
Name
(RefSeq) paramyosin isoform X1
KO
K23284
C1q-related factor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222826
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Opsonins
112222826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
ATG16
Crescentin
Shugoshin_N
SlyX
GIT_CC
Tropomyosin
GAS
Phage_GP20
Uso1_p115_C
TMF_DNA_bd
bZIP_2
UPF0242
DUF724
bZIP_1
CENP-F_leu_zip
MscS_porin
DivIC
MAD
Filament
Cnn_1N
Myosin_tail_1
ADIP
DUF16
CCDC22_CC
ZapB
CCDC-167
Fib_alpha
Nup54
Leu_zip
CALCOCO1
Wtap
Mod_r
DUF4472
DUF5798
DUF2968
DUF3287
Fez1
FPP
PspA_IM30
BLOC1_2
APG6_N
TPR_MLP1_2
HrpB7
FAM76
AAA_13
KASH_CCD
Med9
HMMR_N
DUF3450
PEARLI-4
DUF1664
ATG14
CCDC93_CC
CENP-Q
YabA
DUF4200
Motif
Other DBs
NCBI-GeneID:
112222826
NCBI-ProteinID:
XP_042160615
LinkDB
All DBs
Position
LG23:15215808..15223919
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AA seq
728 aa
AA seq
DB search
MRGVVAMLVLMFYLSGAWAEGESKGGMDQIDQNILFTTIDAVWDELNHLRLMLNNTKKRV
EKLENKNTVLEARVTASESQVVELKKENAALEARMTASESQVDEVKKENAVLEARVTASE
SRVAELKKENAALEARLTASESQLKDLKGKNADLEARVTTSENQVEDLKKEIAGQAALML
SLGSRLTALQSQMAELKKENADQAAQLSALENIVTASESQVAELMAKNAALEARVTVSES
HVAELKGKNAALEARVTASERQVEELEKENADQAAQLLSLGSRVTTLQSQVAELKKENAA
LEARVTASENQVAELMGKNTALEARVTVSESHVAELKAKNAALEARVTASERQVEELEKE
NADQVAELLSLGSRVTTLQSQVAELKKHNAAQAVELSDLKNRLTTSESQVAELKKVNAAL
DTRLTASERQVAELKKENAALEARVTVSESHVAELEKNNAALRTRVTANESKLEELKKEN
AAQAAELSDLKNRVTTSESQVAELKNRVTTSESQVAELKNRVTTSESQVAELKNRVTTSE
SQVAELKNRVTTSESQVAELKKENAALEARLSVAESQVEELRLDRRQVAFSVGLTDSGYV
GPFQTEITLVYEKIFTNIGNGYDTNSGMFSAPVRGVYYFTFTSMGREPGQKMGVYLVKNG
EQMIYNVQDNFHGGYEYMTGAVALELEKDDLVYLRLPKGWGLYDDNYNHIVFTGILLFTT
NPAIGRLH
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgttgtagctatgctggtgctgatgttctatctgtctggggcctgggctgag
ggagagagtaaaggagggatggatcagattgaccagaacattctattcactaccatagat
gctgtctgggatgagctgaatcacctgagactcatgctgaacaacacgaagaaacgagta
gagaagttggagaataagaacacagtcctggaggccagagtgacagccagtgagagccag
gtggtggaactgaagaaagagaatgcagccctggaggccagaatgacagccagtgagagc
caggtggacgaagtgaagaaagagaatgcagtcttggaggccagagtgacagccagtgag
agtcgggtggcggaactgaagaaagagaatgcagccctggaggccagattgacagccagt
gagagccagctgaaggatctgaaggggaagaatgcagacctggaggccagagtgacaacc
agtgagaaccaggtggaagacttgaagaaagagattgcaggccaagcagcactaatgtta
tccttgggaagccgactaacagcccttcagagccagatggcagaactgaagaaagagaat
gcagatcaagcagcacagctgtcagccctggagaacatagtgacagccagtgagagccag
gtggcagagctgatggccaaaaatgcagccctggaggccagagtgacagtcagtgagagt
catgtggcagaactgaagggaaagaacgcagccctggaggccagagtgacagccagtgag
agacaggtggaggagctggagaaagagaatgcagaccaagcagcacaactgttatccttg
ggaagcagagtgacaacccttcagagccaggtggcagaactgaagaaagagaatgcagcc
ctggaggccagagtaacagccagtgagaaccaggtggcagaactgatgggaaagaataca
gccctggaggccagagtgacagtcagtgagagtcatgtggcagaactgaaggcgaagaac
gcagccctggaggccagagtgacagccagtgagagacaggtggaggagctggagaaagag
aatgcagaccaagtagctgaactgttatccttggggagcagagtgacaacccttcagagc
caggtggcagaactgaagaaacacaatgcagcccaagcagtagaactgtcagacttgaaa
aacagattgacaaccagtgagagtcaggtagctgaactgaagaaagtaaatgcagccctg
gacaccagattgacagccagcgaaaggcaggtggcagaactgaagaaagagaatgcagcc
ctggaggccagagtgacagtcagtgagagtcatgtggccgaactggagaaaaataatgca
gccttgaggaccagagtgacagccaatgagagcaagctggaggaactgaagaaagagaat
gcagcccaagcagcagaactgtcagacttgaagaacagagtgacaaccagtgagagccag
gtggcagagttgaagaacagagtgacaaccagtgagagccaggtggcagagttgaagaac
agagtgacaaccagtgagagccaggtggcagagttgaagaacagagtgacaaccagtgag
agccaggtggcagagttgaagaacagagtgacaaccagtgagagccaggtggcagagttg
aagaaagagaatgcagccctggaggcaagattgagtgtcgcagagagccaggtggaggaa
ctgaggctagacagaagacaggtggccttttctgttggtttgacggactcaggatatgtg
ggaccctttcaaactgagatcactctggtctatgaaaaaatcttcaccaacatcggcaac
ggttacgacacaaactctggtatgttctcagcaccagtgagaggagtctactacttcaca
ttcacctccatgggtcgagagcctggacagaaaatgggtgtttacttggtcaaaaatgga
gagcaaatgatatacaacgtccaggacaacttccatggtggttatgagtacatgacaggc
gccgtggctctggagctagagaaagatgacctggtgtacttaaggcttcctaagggctgg
gggctgtatgatgacaactacaaccacattgtctttactggcatcctgctcttcaccacc
aaccctgctattggccgactccactag
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integrated database retrieval system
