Oncorhynchus tshawytscha (Chinook salmon): 112222833
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Entry
112222833 CDS
T05605
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112222833 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112222833 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
112222833 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
112222833 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222833 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112222833 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112222833 (thbs3a)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Opsonins
112222833 (thbs3a)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112222833 (thbs3a)
Exosomal proteins of colorectal cancer cells
112222833 (thbs3a)
Exosomal proteins of bladder cancer cells
112222833 (thbs3a)
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112222833 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_MSP1_1
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
112222833
NCBI-ProteinID:
XP_024241421
LinkDB
All DBs
Position
LG23:15164674..15179524
Genome browser
AA seq
955 aa
AA seq
DB search
MGARRDMPTFLALSTFLFIATCEPMDKQDMQVIDMLTLDSKTSVSAVEKVTGAMSVLSDI
YIVSTFRLPPKMGGVLLGLYSKEENKKYLELAIMGKINKALVRYVREDGKIHTVNLQSTN
LADGRTHSIILRVGGLRRDNLHLELYVNCRLADSSQGLPPLVPLSAEKVEIRNGFKAYAR
LQGAVESLKMALGGSVAKAGTLADCPFQGDSSVYNTVGTTAEVNSILGDHTKALIGQLII
FNQILGELREDIREQVKEMSLIRNTILECQVCGFHDPRSPCSPNPCFKGVSCMETFDYPG
YRCGPCPEGMMGNGTHCQDIDECSIAQPCYSPGACINTVKGFSCELCPPGLWGPPLFGVG
LEYAKYHKQECVDIDECIEVANACVPHSMCTNTIGSFRCGGCKVGYLGNQTVGCVPRRSC
ATLSFNPCDANAHCIIERNGEVSCACNIGWAGNGNTCGTDTDIDGYPDRSLPCMDNDKHC
KQDNCVYTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLEPNKDQQNSDTDSFGDA
CDNCPNVPNIDQKDTDSNGQGDACDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDGVGDAC
DSCPEISNPMQTDIDNDLVGDVCDTDQDTDGDGHQDSRDNCPDHPNSSQLDSDNDGLGDD
CDDDDDNDRIPDIQDNCRLITNPNQKDSNSNGVGDVCENDFDNDSVWDLIDVCPESSEVT
LTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFH
INTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSTPFRAMAQPGLQLKAVKSRTGPG
EYLRNALWHTGDTNEEVKLLWSDPRNVGWRDKTSYRWQLSHRPQVGYIRVKLYEGTEIVA
DSGVVIDTTMRGGRLGVFCFSQENIIWSNLRYRCNDTVPDDFNPYRKQVLLHIKV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaggcgcgatatgccaacttttctggctctatccacatttctattcattgca
acatgtgagccaatggataagcaagatatgcaagtcattgacatgctaaccctggactcc
aagaccagtgtgtctgcggtggagaaggtgacaggtgccatgagtgtgctcagtgacatc
tacatcgtgtccacattccgcctgcctcccaagatgggaggggtgctgctgggcctctac
agcaaagaggagaacaagaagtacctggagctggccatcatgggaaagatcaataaagct
ctggtgcgttacgtgagggaggatggcaaaattcacacagtgaacctccagagcacaaac
ctggctgatggtcgcacacactccattattctccgggttggaggcctgcgcagagacaac
ctacacctggagctctacgtcaattgtcgattggctgactccagccagggcctccctcca
ttggtccctctctctgcggagaaggtggagattcgtaatggcttcaaggcctacgcaagg
ctacagggcgctgtggagtccctcaaaatggcgctagggggcagtgtggccaaagcaggt
accctggcagactgtccattccagggggattcatcagtttacaatacagtcggtacgact
gcagaagtgaactccattctaggagaccacacaaaggctctgattggtcagctgatcatc
tttaaccagatcctaggagagctgcgagaggacatcagagagcaggtgaaggagatgtcc
ctgattaggaacaccattctggagtgccaagtgtgtggcttccacgaccctcgttccccc
tgctcccccaacccctgttttaagggtgtttcctgcatggagacctttgactacccaggg
taccgctgtggtccctgcccagagggcatgatgggcaacggaacccactgccaggacatt
gacgagtgttccatagcccagccctgctactctccaggtgcgtgtataaacacagtgaag
ggttttagctgtgagctctgcccccctggtctctggggcccacccctctttggggtcgga
ctggagtacgccaagtaccacaagcaggagtgtgtagacatcgatgagtgtattgaagtt
gccaacgcctgtgtgccccactccatgtgtaccaacaccatcggctcgttcaggtgtggt
ggctgtaaggtgggttacctggggaaccagacagtgggctgcgtgccccgtaggtcctgt
gccacactcagctttaacccttgtgatgctaacgcccactgcattatagagaggaacgga
gaggtgtcctgtgcgtgcaacattggctgggccggtaacgggaacacttgtggcacagac
acagacattgatggatacccagaccgctctctgccctgtatggacaatgacaagcactgt
aaacaggacaactgtgtttacacacccaactcaggccaggaggacgcagacaacgacggc
atcggagaccagtgtgacgaggatgcagatggggacggcatcaagaatgtggaggataac
tgtcgactagaacccaacaaagatcagcagaactcggacacagactctttcggtgacgcc
tgtgacaactgtcccaatgtccctaacattgaccagaaggatacggacagcaacgggcaa
ggagacgcctgtgacaatgacatagatggagatggtatccccaacgtgctggacaactgc
cccaaggtccccaaccccatgcagacagacagggacggagatggggtaggagacgcctgc
gacagctgccctgagatcagtaaccccatgcagacggacattgacaatgacttggtggga
gatgtgtgtgacactgaccaggacacggatggggacggtcaccaggactccagggacaac
tgccctgaccatcccaacagctcccagctggactcggacaacgatggccttggggacgac
tgtgacgatgacgatgacaatgacaggatcccagacattcaagacaactgcagacttatc
accaaccccaaccagaaagattctaacagtaacggggtgggcgacgtgtgtgagaacgac
tttgacaacgattcagtctgggatctgattgatgtgtgccctgagagttcagaggtcacc
ctgacagacttcagagcctatcagacagtcattctggatccagagggcgatgcccagatc
gatcccaattgggtggtgctcaatcagggcatggaaatagttcagaccatgaacagtgat
cctggtttagctgtgggctacacagcgttcaacggggtggactttgagggcaccttccac
atcaacacggtgacggacgacgactatgcaggcttcatcttcggctaccaggactcctct
tccttctacgtggtgatgtggaaacagacagagcagacctactggcagtcgacacccttc
agggccatggcccaacctggcctgcagctcaaagcagtgaagtcccgtacagggcctggt
gagtacctgcgtaacgccctgtggcacacaggggacaccaacgaggaggtgaagctgctg
tggtcggacccacggaatgtgggctggagagacaagacgtcttaccgctggcagctcagc
cacaggccccaggtgggctacatcagggtgaagttatatgaggggacggagattgtggct
gactctggcgtggtgattgacactaccatgagaggcggacgactgggggtcttctgtttc
tcccaagagaacatcatctggtccaacctgcgctaccgctgcaacgacactgttccagac
gacttcaacccatatcgcaaacaggtcctgctgcacatcaaagtgtga
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integrated database retrieval system
