Oncorhynchus tshawytscha (Chinook salmon): 112222849
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Entry
112222849 CDS
T05605
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112222849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112222849
03036 Chromosome and associated proteins [BR:
otw03036
]
112222849
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112222849
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
112222849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
Motif
Other DBs
NCBI-GeneID:
112222849
NCBI-ProteinID:
XP_024241448
LinkDB
All DBs
Position
LG23:14795299..14812147
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AA seq
683 aa
AA seq
DB search
MERLNEEAVRLSLLKRGLDSSSPAGGATSSERDELLSKRIKMEGHQAMERLKMLAYLKRK
DLAGLEGGGLGGVSGGGALRGEVKGHGSSGGGAYEEKTNGSLRGQVVGAHGMVGKSGKEN
MGEEPVDFSARKGDADRERHTPSPDVIVLSDNEASSPRGPSQGEERLRAANLEMFKGKTG
EERQKMIRALREELRLEEARLVLLKKLRQSQMQKENLVQKVPVVQNTASALQSGAVHGAQ
SMSKMSGRPGHHTPEPQNHRTAQVGYSIAQGHSVIRSATNSSMSQMMMSQSRVIAPNPAQ
LQGQRLSQQKQGGMRSSTGSSNNAISYQQSSTQQVAASQRSGSSSSSAIYMNLTQMQAAG
AAGGISGVSGVGAVSPSATHSPGGTSVGSSMADTASSQAAAKLALRKQLEKTLLEIPPPK
PPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKLRLPSSMEPFSCAQCKTDFTPHWK
QEKGGRILCETCMSSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRIQLQAALATSSAQT
VPSVSKAESMSRHHTHRQAPQPQVTQSQASLQRGLSGSARGVLSNFAQASQLSVASSLLG
MTGKRSGQLGTSGHSRAQQQQQQQQQHHDNRRQLYSIPGVNIAYLNPGNVVGHKGSSLAD
RQREYLLDMIPPRSISQSISGQK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagcgactgaatgaggaggcggtgcggctgagcctgctgaagcgaggcctggactcc
tcctcgcctgcaggcggcgccacgagcagtgagcgagatgagctgctctccaaacgcatt
aagatggagggccaccaagctatggagcgcctcaagatgctggcctatctgaaacgcaag
gacttggccggcctggaggggggaggattgggaggggtctcaggaggcggggccctaagg
ggtgaggtcaagggtcatgggtcttcagggggaggggcttatgaggagaagaccaatggg
agcctccgtggtcaggttgtgggagcccatggcatggtgggaaagagtgggaaggagaac
atgggcgaggagccagtggatttcagcgcccggaaaggtgacgcggaccgggagcgacac
acaccctcccctgatgtgatcgtcctgtcagacaatgaggcgtccagtccaagagggccc
agccaaggggaagaacgcctgagggcagcgaacctggagatgtttaagggtaagacgggg
gaagagaggcagaagatgatcagggctctgagagaggagctgaggctggaggaggccagg
ctggtgctcctgaagaagctgaggcagagccagatgcagaaggagaacctggtgcagaag
gtccctgtggtccagaacacagcgtctgccctccagagtggtgccgtccacggtgctcag
agcatgagcaagatgtctggtcgccctggccaccacaccccagagccccagaaccatcgc
actgcacaggtgggctacagcattgcacagggtcactcggtgatcaggtcagccaccaac
agctccatgtctcagatgatgatgtcacagagcagggtgatagcgcccaaccctgcccag
ctgcagggccagaggctgtcacagcagaagcagggtggcatgcgctcctcgactggcagc
tctaacaacgccattagctaccagcagtcttccacccagcaggtggcagcttctcagcgc
tctggctcctcctcctcctctgccatctacatgaacctgacccaaatgcaggcagccgga
gccgcgggaggaatcagcggggtgtcaggggtgggggcggtcagcccctcagccacacac
agcccaggggggacatcggtgggctcctccatggcagacacagccagcagtcaggcagct
gccaaacttgccctgaggaagcagttggagaaaaccctgctagagatccctcctcccaag
ccgccagcgccgctcctccacttcctgccgtcagcggccaacagcgagtttatctacatg
gtgggcctggaggaggttgtgcagagtgtcattgacagtcagggtaaactgcgtttgccc
tcctccatggagcccttctcgtgtgcccagtgcaagacagacttcacccctcactggaag
caggagaagggtgggcgcatactttgcgagacctgtatgtcgtccaatcagaagaaggca
ctgaaggctgagcacaccaataggctgaagaacgcctttgtcaaggctctacagcaggag
caggagattgagcagagaatccagttgcaagccgctcttgccaccagttcagctcaaact
gttccaagcgtcagtaaggctgagtccatgagcagacatcacacacacagacaggcgcct
cagccccaggtgacccagtcacaggcctccctccaacggggtctgtctggctcggcccgg
ggcgtcctctccaacttcgcccaggcctcccagctctcggtggccagcagcctgctgggc
atgactggaaagcgcagtggacagctgggcactagtgggcacagccgggcacagcagcaa
cagcagcagcagcagcagcatcacgacaaccgccgccagctctacagcatccctggggtg
aacattgcctacctgaacccaggcaatgtggtcggccacaaggggtccagcctggctgac
cgccagagggaatacctgctggacatgatcccgcctcgctccatatcccagtccatcagc
ggacagaaatga
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integrated database retrieval system
