Oncorhynchus tshawytscha (Chinook salmon): 112222853
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Entry
112222853 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222853
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112222853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
Motif
Other DBs
NCBI-GeneID:
112222853
NCBI-ProteinID:
XP_024241459
LinkDB
All DBs
Position
LG23:14631234..14677938
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AA seq
1498 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSDPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSTGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKHGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERNHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKSDVEKPEEVRLI
DLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDQPQDQLRVPTKGSA
PSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRAL
QTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYAY
YNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQWQKSGSVGSRTDTMDSNQRS
RPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLSSMRGSTDKSKLSMKAVLRNAGANGC
SDPASRKPPVGPRDTSTPSPFPPGGVLVRRDQVCLSTFYKDCAEMANSDPDCSCQPGERD
GRPPGPRDTVSRKVVDENYNNVSPRSRGSLTGKLQQLLTPTRHRVSGRRAASVDARRSGG
ENGPVSRVSEQRQSRKVAESLLKAKERLYNATSESSLSVGSDVDLPDTTNLAFPLRKSWD
TNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLNAEI
CVLGPISSTHHSLERTNWNTEEEVESAAKPPGGQEAILGHNGVSEDSSSETSSYSESSSA
TMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNLVWYFHR
LGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSGVPM
RNHSWRRHNHPFTLAFLEEVLRWVGMNEIHKGITLFLETIAKQPGTPKIQRSLYREMLFL
TLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgacagaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggacccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcctgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcaccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagtaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacttgtgctacaagagagctgtagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcggtatccggaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagt
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctatgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtcttggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcacctttgtctaccgatactccatctccggaccccacgtg
ctacccctcgagaagcacatctccagcttcatgcacaacgtcccgttcccttcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgctagctttgtgaagctgctgcagaacctgggccct
gagaatgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgtcctcacctccgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcatggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctatgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgtgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcaaccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaagagtgctcattcgtcagtgatcgccatgcctgtctggag
ttcttcgacgagtgtgtccagaagtcagatgtggagaagcctgaggaggtgcgtctgata
gacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaaccc
caggagccagacggttcagagtgccccactcactacagctatgagacgttccctgtgctc
tgcatggatctgtttgaccagcctcaggaccagctacgtgtccctaccaaggggagtgcc
cccagcagcccagccccgcgacggactaaacaggagattaagctggcacagaagcgggca
cagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctatggg
ctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgccttg
caaacggcatatgaggtgctcaagcacatggagaccaggaaggtggtactaccagatgag
gtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgctgtt
agggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgcatac
tacaacaaggcagtgctggagagcaagtggccctctaccaatcagggtggccgtctacgc
tgggccaagttgcgcaacgttctgatggccgtggcgcagttcagacagccagtcagacaa
tggcagaaaagtggttcagtaggctcgcggacagatacaatggacagtaaccaacgatcc
cgcccacaatctaacctgattcgtcagtccagctggagcggccttagtgaaagctccagc
cacgaatcgctgacggggtctatggtgaagagcaacagcctgagcagcatgagaggctca
acagacaagtctaagctctcaatgaaggcggtgctccggaacgcaggtgccaatggctgc
agcgatcccgcctcccgtaaaccccccgtggggccacgagacacctccaccccttctccc
tttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaccttctacaaa
gactgtgccgagatggccaactctgaccctgactgcagctgccagcctggggagagagat
ggcaggccacctgggcctagagacactgtgagccgcaaggtcgtggacgagaactacaac
aatgtgtcaccacggagtcggggcagcctgacggggaaactgcagcagctgctcacgcct
actcgccatcgagtctcggggcggcgggccgccagtgtagacgcccggcgctcgggggga
gaaaacgggcctgtgagccgggtgtcagaacagagacagtcccgaaaggtggctgagagc
ctactgaaggctaaggagaggctctacaatgctacttctgagagttctctgtcggtgggg
agtgacgttgacctccctgacaccaccaatttggcctttcctctccgcaagtcctgggac
accaaccaagagggagcgggactacaggtgttgatgtcgagctgctccctgtgtcggagc
tgtaactccctggtctatgatgaggagataatggccgggtggacgtctgacgactccaac
ctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaacgctgagatc
tgtgtcctaggacccatcagcagcactcaccacagcctggaacgtaccaactggaacacg
gaggaggaggtggagagtgcagccaagccccctggtggccaggaggccatcctgggtcac
aacggtgtgagtgaggactccagttctgagaccagcagttattctgagagcagcagcgct
accatgggttcatcggtgggcgagtctccccaggtgacggtggcctacctgagcccattg
gtgctgcgcaaggagcttgagagcctgctggagaacgagggcgaggcggtgctggcacag
ggccagctcctggacagccactccatcatcttctggaacctagtgtggtacttccatcgc
ctgggcctgcccagcaacctgctgcagctggttcgctcctcaccgctggccaaccaacta
gcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactgacccct
gacacagaccactggccccccctctacatcctgtggaggatacacagtggcgtacccatg
cggaaccacagctggcggaggcacaaccaccccttcaccctggccttcctggaggaagtg
ctgcgctgggtcggcatgaacgagatacacaagggaatcaccctcttcctggaaaccatt
gctaagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatgctcttcctc
acactggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaaggctgcg
taccaacggctgagtggctccttggggcgcggggagctccgcaggaagcgagcccagcca
cctagccccaaggctgtggactgcagacggagcttcctgctgcccctcgagtgctga
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