Oncorhynchus tshawytscha (Chinook salmon): 112222854
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Entry
112222854 CDS
T05605
Symbol
llgl1
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112222854 (llgl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222854 (llgl1)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112222854 (llgl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Lgl_C
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
112222854
NCBI-ProteinID:
XP_042172075
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MVVVVNMVVVNSVVVNSTAVFLDCAVCIYLYSLTVLCVYCCVYIAVYISVFLDCAVSYGS
PGVEFTGLHRDAAAVAQIHFLQGQGRLLSLLDDNTLHLWELGGASRDRGGAKSEGVVYLE
EKRNYSLLGRPGLESCSASRVTVLLLLRSCDLLCVGTEGGGIHFLDLPRLSLRDNQSLLL
DQVMQSVPEDYRCGKSLGPVESLQEHPKQPGKILIGYSRGLVVLWDLSTCNAEHMFLGKQ
QLESLVWERSGSSFVSSHSDGGYSVWAVASGNTYTHQPVSSSIPYGPFPCKAINKILWRT
IQSGCPVVLYSGGMPRASYGDRHCVTIQQDKQHVTLDFTSRVIDFFTVHTTDPEHDYDDP
KALVVLLEEELVVIDLLTTGWPSVPPPYLAPLHSSAITTSCHLDNVPAKLWDRLAAAGNS
QGVQPGVRHTHGVRHAHGSWPICGGKNLAPPPRQQELLLTGHEDGTVRFWNVSAVAMTPL
YKLSTANVFHTDCDPNDDPLDPTNDPEALQEEWPPFRKVGCFDPYSDDPRLGIQKISLCK
YSCRLVVAGTAGQVIVLGLSDEWSDHTVDVSTVDLLQDREGFTWKGHDRLEPRASPAPFP
PGFQPLVLVQALPPASVTSVMLHAEWNLVAFGTSHGFGLFDYHRRTAVLARCTLHPNDSL
AMEGPLSRVKSLKKSLRQSFRRIRKSRVSGKKRPIPTPTSKIQEANAALADQEEVAPVQR
RIEPRSADDSLSGVVRCLCFADTYLRDGTHHGPHTHTPTHKQGHSPTHTGPTHTHVFSLP
KVGAKTKFKLTAHEGCRVRRVAMVTVCSTAQEDYSETSLVCLTNLGDLHLFNVPALRPQV
RYDCIRKEDISGIASCVFTRNGQGFYLISPSEYQRFSLSAKVITEPLCTVELERPLETHI
SDDAAIPLRANGTHRNQAEGLTEDPQCGLSSPPPLSPLDSPLSMADVSLDTTGELTVEDV
RDFLT
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggtggtgaatatggtggtggtcaacagtgtagtagttaattcaacagctgta
ttccttgactgtgctgtgtgtatatatctgtattccttgactgtgctgtgtgtatattgc
tgtgtgtatatagctgtgtatatatctgtattccttgactgtgctgttagttatggatct
ccaggggtggagtttacaggactacacagagacgctgcagccgtagcgcagatacacttc
ctccaaggacagggccgtctgttgtcgctgcttgatgacaacacgctgcacctgtgggag
ctgggcggcgcttcccgggacaggggaggggctaagagcgagggtgtggtctacctggaa
gaaaaacgcaactacagtctcctgggacgacctggactagagagctgcagtgcaagccgt
gtgacagttctgctgttgttgaggtcatgtgacctgctgtgtgtcggcaccgagggaggg
ggcatacacttcctggatctgccacgcctctcgttgagggataaccaatcactcctgctg
gaccaggtgatgcagagcgtacctgaggactacaggtgtgggaagtctctgggaccggtg
gagtcgttacaggaacaccccaagcagccagggaagattctgattggctacagcagaggc
ctggtcgtcctatgggatctcagcacctgcaacgcagaacacatgttcctgggaaaacag
cagctggagtccctggtgtgggaacgttccggtagctccttcgtcagttcccatagcgac
ggggggtacagcgtgtgggctgttgccagtggtaacacgtacacacaccagcccgtgtcc
tcgtccatcccctatggtccgttcccttgtaaagccatcaacaagatcttatggaggacg
attcagtcagggtgtccagtagtcctctacagtggaggaatgcccagggccagttatgga
gaccgtcactgtgtgaccatccaacaggacaaacaacacgtcactctagacttcacatcc
agagttatagacttcttcaccgtccacaccactgacccggagcacgactatgatgatcct
aaagccctcgtggtgctactggaggaggagctggttgtaatagacctcctgaccaccggg
tggccctctgtccctcctccctacctggctccgctccactcctccgccatcaccacatcc
tgtcacctggacaacgtccctgccaagctctgggaccgcctggccgccgccgggaacagc
cagggcgttcagcctggagtgagacacacacacggggtgagacacgcacacgggagttgg
ccgatatgtggagggaagaatctagcgcccccgcccagacaacaggagttgctgctgacg
gggcatgaggacggtacagtgcggttctggaatgtgtctgctgttgccatgactcctctc
tacaagctcagcacggctaacgtcttccataccgactgtgaccctaacgacgaccccctg
gaccctaccaatgaccccgaagcactgcaagaggagtggcctcccttcaggaaggtgggc
tgttttgatccgtatagtgatgatcctcgcctggggatccagaagatcagtctgtgtaaa
tacagctgtagactggtggtggccgggacagctggacaggtgatcgtgctgggtctgagt
gatgaatggtcggaccacacggtcgatgtctccacggtcgacctgcttcaggaccgagag
gggttcacctggaagggccatgataggctggagccccgagccagccccgcccccttccct
ccaggcttccaaccattggtcctggtgcaggccctgcccccagcctctgttacctccgtg
atgctgcatgcggagtggaacctcgtagcgttcgggacgagtcacggcttcggactgttt
gactaccacagacgcactgctgtactggccaggtgtaccctgcaccctaacgactcccta
gcgatggagggtcctctcagcagagtgaagagtctgaagaagtctctcagacagagcttc
agacgcatcaggaagagtagagtgtctgggaagaaacgccccatccccacccctaccagc
aagatccaggaggccaacgcagcgctagctgaccaggaggaagtagctccggtgcagagg
aggatcgagccaagatcagctgacgactctctatcaggagtggtgcgatgcctctgtttc
gctgatacatacctcagagacggtacacaccacggtccacacacacacacacctactcac
aaacagggacactcacctactcacacaggtcccacacacacacacgtgttcagtcttcct
aaggtcggtgcgaagaccaagttcaagctgacggctcatgagggttgtcgtgtgcggagg
gttgccatggtgacggtgtgttccacagcccaggaggactacagtgagaccagtctggtc
tgtctgaccaaccttggagacctgcacctgtttaacgtacctgccctacggccacaggta
cgttatgactgtatccgtaaagaggacatcagtggcatcgcttcctgtgtcttcacaagg
aacgggcaggggttctacctgatctctccatcagagtaccagcgtttctccctgtcagct
aaagtcatcacagaacctctgtgtactgtggagctggagagacctctggagacacacatc
agcgacgacgcagccatacctctccgggccaacggaactcaccggaaccaggctgaaggg
ttaaccgaggacccccagtgtggcctgtcctccccgcctcccctctcccctctggactcc
cccctcagcatggctgacgtcagcctggacaccaccggagaactcactgtagaggacgtc
agggacttcctcacgtaa
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