Oncorhynchus tshawytscha (Chinook salmon): 112222925
Help
Entry
112222925 CDS
T05605
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04140
Autophagy - animal
otw04216
Ferroptosis
otw04621
NOD-like receptor signaling pathway
otw04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112222925
04136 Autophagy - other
112222925
09143 Cell growth and death
04216 Ferroptosis
112222925
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112222925
04622 RIG-I-like receptor signaling pathway
112222925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222925
03029 Mitochondrial biogenesis [BR:
otw03029
]
112222925
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
112222925
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112222925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
Hen1_L
DUF6782
Motif
Other DBs
NCBI-GeneID:
112222925
NCBI-ProteinID:
XP_024241557
LinkDB
All DBs
Position
LG03:17900769..17923240
Genome browser
AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPTCFTLYQDEITEREAEPFYLLLPRMSYLTLVTDKVKKHFLKVM
KAEDIEEMWFDFEGTSLKWHYPIGLLFDLHASNTALPWSITVHFKNFPERDLLHCPSNSV
IEAHFMSSIKEADALKHKSQVINDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEEG
GFRYIPFRIYLTMSDRPFIQKLFRPISPDGHTHTLGDLLKEVYPVAIPNDDESKHYQVVI
HGIEPLLETPLQWLSEHLSHPDNFLHISVIPAPSD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgctgcgagatgtttggtttggtcggattccgacctgcttc
acactttaccaggatgagatcacagagagagaggccgaacccttctatctcctcctgcca
aggatgagctacttgactctggtcacagacaaggtgaaaaagcacttcctgaaggtcatg
aaggccgaggacatagaggagatgtggtttgatttcgagggaacctcactcaaatggcac
tatccaatcggattactgtttgacctgcatgcctccaacactgccctgccctggagcatc
actgtgcactttaagaatttcccagagcgtgacctgctccactgcccctctaactctgtg
attgaggcccacttcatgtccagcatcaaggaggcggatgccctcaaacacaagagccag
gtcatcaacgacatgcagaagaaagaccacaagcagctgtggatgggcctgcagaacgat
aagtttgaccagttctgggccatgaaccgtaagctgatggaataccccacagaggaggga
ggctttcgctacatccccttcaggatatacctgacgatgagtgacagaccgttcatccag
aagttgtttcgccccatctcgcccgacggccacacacacacgcttggggacctgctgaag
gaggtgtaccccgtggctatacccaacgatgacgagtccaagcattaccaggtggtgatc
catgggattgagcccctgctggagaccccgttgcagtggctgagcgagcacctcagtcac
cctgataacttcctccacatcagcgtcatacccgcgcctagcgactga
DBGET
integrated database retrieval system
