Oncorhynchus tshawytscha (Chinook salmon): 112222935
Help
Entry
112222935 CDS
T05605
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112222935
03029 Mitochondrial biogenesis [BR:
otw03029
]
112222935
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
112222935
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
112222935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_4
Ank_3
Ank_5
Borrelia_P83
TFIIA
GrpE
Motif
Other DBs
NCBI-GeneID:
112222935
NCBI-ProteinID:
XP_042160553
LinkDB
All DBs
Position
LG23:complement(12779004..12785364)
Genome browser
AA seq
470 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDDDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSQSGADINAKDMLKMTALHWAAQHGHREV
AELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGV
VNLSDLVNTTAKSGESVSTTSVLATLAALAEASGPMGNNAGKSEDAIAADSVDSAIQHVV
GDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQEPYPSLARK
RRIESAVILTRPKEKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQEAEQYRLRLE
EAIEQQQSNNTSNATGSTCTGVQEVEEEVVQIEKQHETEERVVEEDKVEGEEDVPFPEDT
ILVKVEEELDSGEGEQITVDETEETEKASTKVTTTPKRGRGRGRGRGRRR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggttgacctggggaagcggctgctggaggctgcacgggcagggctggatgat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacatcc
ccgctccatctagcggctcagtacggacaccactccactgctgaggtgctccttcgagca
ggtgttagcagggatgcccggaccaaagtggacaggaccccactccacatggcggccacg
gagggccactccaatatagtggagctgctagtcagtcagagcggagcggacatcaacgct
aaggacatgctgaagatgacagccctgcactgggcggcccagcacggtcacagagaggtg
gcagagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagaca
ccctttgacattgccatggacaccagcaatactgagctcatgatactgttacaggatggc
atgcagaaccaagtgaacatgaacccagagccccagttcataatttcctctgctggggtc
gtgaacctctctgacctcgtcaacaccaccgccaagtcaggagaatctgtctctaccacc
tcagtcctggcaacactggcagccctggcagaagcctccggtcccatgggtaacaatgca
ggcaaatctgaggatgcgatcgcagcagattctgtggactccgccattcagcatgtagtg
ggcgatggaggtcagagggtcatcaccatagtgacggaccaacacggcaacctgcagcca
gcgggacttggacagcagttctttgtcactatgcaggggcagcaaatggtggcagtcccg
gctggtcagatcacagaggaggtggtggaacaggagccttatccctctctggcacgcaag
aggagaatagagtctgcagtcatcctaaccagacccaaagaaaagaaagcgaagtcaggg
gacagcagtcgggagcagctccagaagcagttgcaggaggccaaccggaaggcccaggag
taccgcacacagctcctacagaaggagcaggaggctgagcagtaccgcctccgactagag
gaggccatagagcaacagcagagcaacaataccagcaatgctactggttctacctgcaca
ggtgtccaggaggtagaggaggaggtggtccaaatagaaaaacaacatgagacagaggag
agagttgtagaggaagacaaagtggaaggggaggaggacgtcccatttccggaagacacc
attctggttaaagtggaggaggagctggattcaggggagggagaacagataacagtggat
gagaccgaggaaacggagaaggcttcaactaaggtcacaacaacccccaaacgggggaga
gggaggggacgaggacgtgggaggaggcggtag
DBGET
integrated database retrieval system
