Oncorhynchus tshawytscha (Chinook salmon): 112222941
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Entry
112222941 CDS
T05605
Symbol
scnm1
Name
(RefSeq) sodium channel modifier 1 isoform X1
KO
K24827
sodium channel modifier 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112222941 (scnm1)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
112222941 (scnm1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SCNM1_acidic
zf-SCNM1
Motif
Other DBs
NCBI-GeneID:
112222941
NCBI-ProteinID:
XP_024241596
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All DBs
Position
LG23:complement(12457830..12461650)
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AA seq
271 aa
AA seq
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MSFKRDGNDQSQLNILKKRRVADLLSNFIPEDEAALMKNGRYTCLVCSYRPVFDTVDMLT
VHRKGKRHLEGMKWFYGKKTQLKNEISKRKHENYVQAEDSQQEPSSSAPLLTQTRKLTHH
ALLKTVPYNSCHKKTSTKSEKGSTSSIPDCDISPSSTRLSSPHQTSVETIRDTDIMSLPS
SNSNTAVNQGSCPIGSNNEVCKESEPTATQESEPMTAQRRREMEHYLKLKSAGWLQDRSG
QWVKDENVEFDSDEEEPSLLPSSPPTDATEG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaaaagagatggcaatgatcagagtcaattgaatatcctcaagaaacggcgt
gttgcagatctcctgtccaatttcattccagaggatgaagcagccttgatgaaaaatgga
agatacacctgccttgtgtgttcataccgtcctgtttttgatacagttgacatgctgaca
gtacacagaaaggggaaaagacatctcgaagggatgaagtggttttatggaaagaaaact
caactgaaaaatgagatatctaaacgaaaacatgaaaactatgttcaagctgaagatagc
caacaggaaccctctagttctgcccccctgttgacacagacacgtaaactcacccaccac
gccttattgaagactgtgccatacaacagttgtcacaaaaagacaagtacaaagtctgaa
aaaggatcaactagttccattccagactgtgacatcagcccctccagcacaagactatca
tcaccacatcaaacgtcagtggagacgataagagatacagacatcatgtccttacccagt
tccaacagtaatacagcagtcaatcagggatcgtgtccaatcgggagcaataatgaagtg
tgtaaggagtctgagccaacagcgacccaggagtcggaacctatgacagctcaaaggagg
agagagatggagcattaccttaaattgaaaagtgcgggatggctgcaagacaggagtggc
cagtgggtaaaggatgagaatgtggagtttgattcggatgaagaggaaccctcattgctc
ccatcctctccccccactgacgcaacagagggctga
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