Oncorhynchus tshawytscha (Chinook salmon): 112222949
Help
Entry
112222949 CDS
T05605
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222949 (lingo4b)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112222949 (lingo4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
Ig_2
V-set
LRRNT
Motif
Other DBs
NCBI-GeneID:
112222949
NCBI-ProteinID:
XP_024241605
LinkDB
All DBs
Position
LG23:complement(12293288..12311054)
Genome browser
AA seq
612 aa
AA seq
DB search
MFVESVVRWGAWSILLQCGLLGVSAGDFPWPCPARCVCRLETLDVNCSDKQLTSVSQGFA
SGTQRINLSRNKLKTLGRRQFFGLTQLEDLDISDNVIAMIEVEAFQGLQNLKTLCIRSNR
LKIISVGVFSGLPSLRFLDLSENEILVFLDYTFRELVSLHQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMFRLTISALPNNAFRHLHRLRSLVISHWP
LLDTLASNSLIGLNLTSLVISSCNLSAVPYQVLRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGNLLRIEPGAFRGLAYFRLLNVTSNQLSTLEESAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPMPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYRCTAGNAAGNDSLYVSLYVKGFPRNRTMPFFTDEGWIESSHAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRTSMGVGGGGGGG
GGDAGKFTMKLI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgttgtccgatggggggcatggagcatcttgctccagtgtggatta
ttgggtgtgtcagcaggggacttcccctggccttgccctgccaggtgtgtgtgtcggctt
gagactttagatgtgaactgctctgacaaacagctgacttctgtgtctcagggcttcgct
agtggcacccagcgcattaacttatctcgtaacaagctgaagacactgggtcgtcgccag
ttctttggattgacccagctagaggatctggacattagtgacaatgtcatcgccatgatt
gaagtggaggctttccagggcctgcagaacctcaagaccctgtgcattaggagcaaccgc
ctcaagatcatctctgtgggggtcttctccggactgcccagcctgcgcttcctggacctg
agtgagaacgagatcctagtctttctggactacaccttccgtgaattggtgagcctgcac
cagctggaggctggggagaatgacctggtgttcatctcccagcgggcctttaccggcctg
cagaacctgcaggagctcaatctggaccgcagcaacctgacctccatccccaccgaggca
ctgtcccagctccagagcctgactcggctgcgcatgttccgcctcactatttcggcgctg
cccaacaatgccttccgccacctgcatcgactgcgcagcctcgtcatctcccactggccc
ttgctggacaccctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtgctgtcccataccaggtgctgcgccacctggtctaccttggc
tacctggacctgtcctacaaccccatcacagccatccaaggtaacctgctgggggacttg
ttgcggctgcaggaactgcacctagctgggggcaacctgctccgcatcgagccaggggcc
ttcagggggctggcttacttccgtctgctcaacgtgacatccaaccagctcagcacgctg
gaggagagtgccttccactcggtggggaatctgcaggtcctgcggctagatgggaacccc
ctggcctgcgactgccgactgctctgggtggtccgccggcgacagcgcctaaactttgac
ggtcgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcagagaaagagcttccgagactgttcacctgccggcaggcccgaattgtagaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcctgcaaggcggatggt
gacccaatgccctcctttacctggttgtcagcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactctagaggtacgctatgcccaggttcaggacagc
ggcacataccggtgcacagcgggcaacgcagctggtaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcaccatgccctttttcactgacgaaggctggata
gagtcctcacacgcccctactgccaactcctctgcccaggtggccaaccagtacccgttt
gatgccaagacactgatcatcgccaccaccatgggcttcctgtccttcctcagctcagtg
gctatctgcttcgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtacctcaatgggggtaggaggaggaggaggagggggt
ggaggtgatgctggcaagttcaccatgaagcttatctaa
DBGET
integrated database retrieval system
