Oncorhynchus tshawytscha (Chinook salmon): 112222970
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Entry
112222970 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquilin-4
KO
K04523
ubiquilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112222970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112222970
03051 Proteasome [BR:
otw03051
]
112222970
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112222970
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112222970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
Rad60-SLD
UBA
Ubiquitin_5
YukD
Rad60-SLD_2
Dsc3_N
CUE
HOIP-UBA
Motif
Other DBs
NCBI-GeneID:
112222970
NCBI-ProteinID:
XP_024241625
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Position
LG23:11837699..11843368
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AA seq
590 aa
AA seq
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MAENSGTDPTVDSNVVENAASDGTMIVVTVKTPKDKEEIAISEDSSVAQFKEEISKRFNA
KQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAPKTTVGGTSQSSASSSGTPQAN
SSINPSAVPNASTTPGTGPTPASTQPPNLLSGFGDLSSLSGMGMGSANFMEMQQQMQRQL
MSNPEMLSQIMDNPLVQNMMSNPDLMRQMIVTNPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSAX
GGNLDSGVQPSRTENREPLPNPWGPPGTSPSESRGTGASTTTTSSAGGTAPSASNPLGIN
ASGLGNGVFGSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPELASQAMLNNPL
FAGNTQLQEQLRHQMPVFLQQMQNPESLSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPS
LAPGEIPVIPPTTGGSVAPENLPPPTQGSNPTAATNPSQQQQQLMQQMLQMFAGGGGGSL
TLTPEVRFQQQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaacagcggcacagatcccactgtggattccaacgttgttgaaaatgctgcc
tcagatgggaccatgatcgtggtcacggtaaaaactccgaaagataaagaggagatagca
atctcggaggattcttctgtcgcacagtttaaagaggagatatccaaaaggtttaatgcc
aagcaggaccagctggtgttgatttttgctggcaaaatcttaaaggatggagacacactg
aaccaacacggcatcaaggacggactcactgttcaccttgtcatcaagactgctcccaag
accacagttggtggcacatcccagtcctctgcatccagctctgggaccccccaggccaac
agcagcatcaatcctagcgcagtgcccaatgccagcacaacaccaggcactgggcctacc
ccagcctccacacagccacccaacttactgagtgggtttggtgacctatctagcctgtca
ggcatgggcatgggctcagccaacttcatggagatgcagcagcagatgcagagacagctg
atgtccaacccggagatgctgtctcagatcatggacaaccctctggtgcagaacatgatg
tctaacccagacctgatgaggcagatgattgtgaccaaccctcagatgcagcagctgatg
gagcgtaaccctgagatttcccacatgctcaacaaccctgaacttatgagacagaccatg
gagttggcaaggaacccagccatgatgcaagagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcattcctgggggatacaacgccctccggaggatgtacacagacatc
caggagcccatgttcagtgccgctagagagcagtttggaaacaatcccttctctgctntt
gggggcaacttagactctggcgtgcagccctccagaacagagaacagggaacccttacca
aacccatggggaccccctggaacatccccctcagaaagcagggggactggcgcttccacg
acgacaacctcctccgctggcgggactgcacccagtgcctccaaccccctgggcatcaac
gcctctgggctgggcaatggtgtgttcggtagccctggcatgcagagtctgatgcagcag
atctctgagaacccccagctcatgcagaacatgctgtctgcgccctacatgcgcagtatg
atgcagtcgctggcgcagaaccctgaactcgcctcgcaggcaatgctgaacaaccccctc
tttgccggaaacacccagttacaggaacagttgagacatcagatgccggtctttctccaa
cagatgcagaatcctgagtcactgtccgtgatgactaacccccgggccatgcaggctctc
atgcagatccagcagggcctgcagaccctacagacggaagcccccgggctcatgcccagt
ttggctcctggtgagatcccagtgattcctccaaccacaggaggcagtgtggccccagaa
aaccttcctcccccaacacagggctcaaatcccaccgctgccactaacccatcccagcaa
cagcagcagctcatgcagcagatgttacagatgtttgctgggggaggaggcgggtcattg
accctaaccccggaggtgcggtttcagcagcaactggaccagctcagcgccatgggcttc
atcaaccgcgaggccaacctgcaggccctcatcgccacagggggagacatcaatgctgcc
attgagagactgctgggctcccagccctcctaa
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