Oncorhynchus tshawytscha (Chinook salmon): 112222986
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Entry
112222986 CDS
T05605
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
otw03015
mRNA surveillance pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112222986
09122 Translation
03013 Nucleocytoplasmic transport
112222986
03015 mRNA surveillance pathway
112222986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112222986
03041 Spliceosome [BR:
otw03041
]
112222986
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112222986
Spliceosome [BR:
otw03041
]
Complex C
Other components
EJC/TREX
112222986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
112222986
NCBI-ProteinID:
XP_024241640
LinkDB
All DBs
Position
LG23:11373679..11377341
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AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggtcgaggtttt
ggttcagaggagggagcaaggtccagagtgagagaggactatgataccgtggagcaggat
ggagatgagccaggtcctcagagatctgtggagggttggatcctttttgtgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgcggagtttggagagatcaag
aacctacatctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcctatcagtgtggactggggcttcgtcagaggaccacccaagagcaagaggagg
ggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga
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