Oncorhynchus tshawytscha (Chinook salmon): 112223005
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Entry
112223005 CDS
T05605
Name
(RefSeq) DNA-binding protein SATB1 isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112223005
03036 Chromosome and associated proteins [BR:
otw03036
]
112223005
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
112223005
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
112223005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112223005
NCBI-ProteinID:
XP_024241672
LinkDB
All DBs
Position
LG23:10646426..10700515
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AA seq
913 aa
AA seq
DB search
MMDHLSEACLGKENCDLVNSMGDRDSKAPPAKLARLEQNGSPVGRARLGSTGAKLAGVPY
KPSGHLLKNCHKRGNMLPVFCVVEHYESPIEFDSKEEHAEFVLVRKDMLFNQLIEMALLS
LGYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLE
DLPPEQWTHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFG
RWYKHFKKTKDMMGMRQPSQLEGYLGTCVLHDSPRGNTLGPRKRSCLGCSLQADMDGLSD
HSPPGPNHNHLTFSQQPIPGSTAEQPPSSPVLPLPPPSHSGGQTPGRPAQLPPGLHHPGL
VSTPISPQLVNQQLVMAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRNSLTKPLEPQVAS
NTEVSMEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLR
AMQNFLQLPEAERDRIYQDERERSLTAASAMGPAPLISTPPTRPVQVWNEQQPRREDCNN
VRPEDWNPRIPVGISPIPESRKPGSITLFSNPFADTPYPAQVKASPLPGEWNGKTESCIL
NINSSIYDEIQQEMKRAKVSQALFAKVAASKSQGWLCELLRWKEDPSPENRTLWENLSMI
RRFLSLAQAERDAIYEQESTAGQQQHHADRPPHTMHMSTDPMQNPTLMYMSHTDPLQSQT
HQPPQQQHQLPMSLQHPSQPPLSQQPMQQQQQQPPMGPRLPPRQPSTASPAETEDEGRGG
GGTKARSGGGKISQEALGILQSFIQDVGMYPDEEAIHTLSAQLDLPKLTIIKFFQNQRFY
VNHPAKPPKEPSNSSSSSPAFEEELSEFREGSAELLKELEESTQTNSTIFSIKIEEHLAR
SEALSESDHESKE
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgatggaccatctcagcgaggcgtgcctggggaaggagaactgtgacctggtcaacagc
atgggcgaccgcgactccaaggcccccccagccaagctggcccggctggaacagaacggc
agccccgtgggcagggcccgcctgggcagcacgggggccaagctggccggggtaccctac
aaaccctcgggacacctcctcaagaactgccacaagaggggcaacatgctccctgtgttc
tgcgtggtggagcattacgagagccccatcgagtttgacagcaaggaggagcacgccgag
tttgtgctggtcaggaaagacatgctgttcaaccagctcatcgagatggcccttctgtca
ctgggctactcgcacagctcggcggcacaggcgaaaggtctcattcaggtgggcaagtgg
aacccggtcccactgtcctacgtgacggacgcgccggacgccaccgtggcagacatgctg
caggacgtgtaccatgtggtcacgctgaaaattcagctgcacagttgtcctaaactggag
gacctgccgccagagcagtggacccactctacagtaagaaatgccctcaaggagttactc
aaagacatgaaccagagctctctggcaaaagaatgtcccttatcacagagtatgatctcc
tccattgtgaacagcacttactatgcaaatgtgtcggcggcgaagtgtcaggaatttggg
cgctggtataaacatttcaagaagacaaaagatatgatgggcatgcgccaaccctcgcag
ctggagggctacctggggacgtgtgtcctccacgacagcccgcgtggcaacacactaggc
ccgaggaagaggtcatgtctaggatgctccttacaagcagacatggacggcctgtccgac
cactcccctccgggccccaaccacaaccatctgaccttctcccagcagcccatcccgggc
agcacggccgagcagcccccctcctccccggttctccccctgccccctccgtcccacagt
gggggccagacgcccggccgcccggctcagctcccccctggcctgcatcatcctggattg
gtgtccacccccattagcccccagctggtgaaccagcagttagtcatggcccagattctc
aaccagcagtatgccgtcaaccggctcctggcacagcagtcgctgtcgcagcagtacctc
aaccacccaccggtcaaccgaaactccctgaccaagccactggagccccaggtagccagc
aacaccgaggtgtccatggagatataccagtgggtgagggacgagctgaagagggccggc
atctcccaagccgtgttcgcccgcgtggctttcaacaggacccagggcctgctgtctgag
atcctgcgtaaagaggaggatcctaagacggccagccagtctctgctggtcaacctgcgg
gccatgcagaacttcctgcagctgcccgaggccgagcgagaccgtatctaccaggacgag
agggaaaggagcctgacggctgcctcggccatggggcctgcgccactcatcagcaccccg
cccacccggccagtgcaggtatggaacgaacagcagcccaggagagaagactgtaacaac
gtcagacctgaggactggaaccccagaatccctgtgggcatctctcctatccccgaatcc
agaaaacccggcagcatcaccttgttttccaacccttttgctgacactccttatcctgcc
caggtgaaggcctctccgctccccggcgagtggaacggaaagacggagagctgcatcctc
aacatcaactcctccatctatgacgagatccagcaggagatgaagagggccaaggtttcg
caggctctgtttgccaaggtggctgcctccaagagtcagggctggctgtgtgagcttctg
cgctggaaggaggaccccagcccggagaaccgtacgctgtgggagaacctgtccatgatc
cgccgcttcctgagcttggcccaggcagagcgtgacgccatctacgaacaggagagcacg
gccggccagcagcagcaccacgccgaccggcccccgcacacaatgcacatgtccactgac
cccatgcagaacccaactctgatgtatatgtcccacacagacccactacagtctcagacc
catcaaccgccacagcagcagcaccagctccccatgtccctccagcacccctcccagcct
ccactgtcccagcagcccatgcaacagcagcagcagcaaccacccatgggcccccgactg
ccccctcgccagccctccaccgcttccccggcagagacagaggacgagggccgtggtggc
ggaggcaccaaggctcgctccggcgggggcaagatctcccaagaggccctaggcattcta
cagagctttatccaggatgtggggatgtacccagacgaggaggccatccacaccctatcg
gcccagctggacctgcccaagctcaccatcatcaagttcttccagaaccagcgcttctac
gtcaaccacccggccaagccgcccaaggaacccagcaacagcagtagcagcagccctgcc
ttcgaggaggaactgtcggaattcagggagggcagcgccgagctgctgaaggagctggaa
gagagcacacagaccaacagcaccatcttctccatcaagatcgaggagcacctggcccgc
tctgaggccctctcagaatctgaccacgagtccaaggagtag
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