KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112223008
Entry
112223008         CDS       T05605                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137  Mitophagy - animal
otw04144  Endocytosis
otw04145  Phagosome
otw04148  Efferocytosis
otw05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112223008
   04145 Phagosome
    112223008
   04137 Mitophagy - animal
    112223008
   04148 Efferocytosis
    112223008
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112223008
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112223008
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:otw04147]
    112223008
   04031 GTP-binding proteins [BR:otw04031]
    112223008
Membrane trafficking [BR:otw04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    112223008
 Endosome - Lysosome transport
    112223008
Exosome [BR:otw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112223008
  Exosomal proteins of other body fluids (saliva and urine)
   112223008
  Exosomal proteins of colorectal cancer cells
   112223008
  Exosomal proteins of bladder cancer cells
   112223008
GTP-binding proteins [BR:otw04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    112223008
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 112223008
NCBI-ProteinID: XP_024241687
UniProt: A0A8C8FJK5
LinkDB
Position
LG23:complement(10592513..10601464)
AA seq 216 aa
MASRGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAK
KLPKNEPQADGAYSGRNRGVDLTAAAQPASHSCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaagtaggggtggtgcaacacgacccaatgggccgaacacaggcaacaagatctcc
cagttcaaattagtactcttaggggagtccgccgtgggaaagtccagtcttgtacttcgc
ttcgtcaagggccagtttcatgaattccaagagagcacaatcggagctgccttcctgact
cagacagtatgtttggatgacacaacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcttagcacccatgtactacagaggtgcccaggccgcgatcgtggtc
tacgacatcactaacaaagagtcctttgcacgagcaaagaactgggttaaggagcttcag
agacaagccagtccaaatattgtaatagctttagctgggaacaaagctgaccttgcaaac
aaaagagcattggattttcaggatgcccagtcatacgcagatgataacagtttactgttc
atggaaacatcagcaaagacctctatgaacgttaatgagatgttcatggctattgcaaag
aaattacccaagaacgagcctcaagctgacggcgcgtacagtgggcggaaccggggagtg
gatcttacggcggcagctcagccagccagtcactcctgctgcagtacctaa

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