Oncorhynchus tshawytscha (Chinook salmon): 112223016
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Entry
112223016 CDS
T05605
Name
(RefSeq) GATOR complex protein MIOS isoform X1
KO
K20407
SEA/GATOR complex protein SEA4/MIOS
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112223016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112223016
Membrane trafficking [BR:
otw04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
112223016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIOS_WD40
MIOS_a-sol
zinc_ribbon_16
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
112223016
NCBI-ProteinID:
XP_024241698
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All DBs
Position
LG23:complement(10339720..10348533)
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AA seq
880 aa
AA seq
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MSGSKPDILWSPHHADRYVICDSELGLYRIGPVGCSETKAGALPLSVETAATLLAINSDT
PYMKCVAWYPKHEPECLLAVGQANGRVVLTSLGQSHNSKCKELMGKEFVPKHARQCNTLA
WNPVDSNWLAAGLDKHRADFSVLIWDISSKFSPEASVAAEKIRLSSGDTDSGLVVTKPLY
ELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKTFVNTKAIQGVTVDPHFPDR
VASFFEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRMGLLATLTRDSNIIRLYDMQ
HTPTPIGDETEPTIIERSVQPSNSLIGSFAWHPTSQNRMVVVSAANRVMTDFTVFERISL
AWSSTTSLMWACGRHLYECAEGVGGEGTVEKDIATKMRQRAQSRYGHDTVQVWKNHLLAG
GDDPQLKSLWYTLFFMKQYTEDVEQKQQGSKQALVYSGIKNIVKSSSGTTENRRCWSGSD
RQTDVPRFHSEERSLALRLCGWINRGPDINVEPFLRSLEGEGEWERAAAVALFNLDIRRA
IQILNKGASAERGDLNLNVVAMALSGYTDEKSSLWREMCSSLRLQLKNPYLCVMFAFLTS
EPGTYDGVLYESSVAVTDRVAFACMFLNDSQLPRYMEKLTSEMKEVGNLEGILLTGLTKD
GVDLMESYVDRTGDVQTASFCMLKGSPGEVVKDPRVQCWIENYRNLLDAWRFWHKRAEFD
IHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAMPHQGRGFSQYGVSGSPTKSKVTSCPG
CRKPLPRCALCLMNMGTPVSNCPGTGHGTGKSDEKVDLTRENKLAQFNNWFTWCHNCRHG
GHAGHILSWFRDHTECPVSACTCKCMQLDTTGNLVPSDSH
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcaaagccagacattttgtggtctccccaccacgcggaccgctatgtcatc
tgtgactcagagcttggactgtaccgcatcggacctgtggggtgcagcgagaccaaagcc
ggagctctccccctctctgtggagaccgctgctaccctattagcgatcaactcagacacc
ccatacatgaaatgtgtggcctggtacccaaagcacgagcctgaatgtctgctagcagtt
ggacaggctaacggcagggtagtcctcactagcctaggccagagccacaactccaagtgc
aaggagctgatggggaaggagtttgtgcccaagcatgcacgtcaatgcaacaccctagcc
tggaaccctgtggacagcaactggctagccgccgggctggacaagcacagagcagacttc
tcagtgctcatatgggacattagcagtaagttctccccagaggctagtgtagccgctgaa
aagatccgtctctcgtcaggagacacagactctggcctagtggtgaccaagcccctgtat
gagctaggccagaacgatgcttgcctgtccctctgctggctgccccgcgaccagaagctg
ctcctggctggcatgcaccgcaacctggccatctttgacctgcgcaacaccagccagaag
accttcgtcaacaccaaggccatacagggtgtgacagtggacccccacttccccgaccgc
gtggcctccttcttcgagggccaggtggccatctgggacctgcgcaaatttgagaagcca
gtgctcacgctcaccgagcagcccaagccgctcaccaaggtggcctggtgccccacgcgt
atgggcctgttggccacgctaacgcgtgacagcaacatcatccgcctttacgacatgcag
catacgcccacgcccatcggcgacgagacagagcccacgatcatcgagcgcagcgtgcag
cccagcaacagcctcattggcagcttcgcctggcaccccacttcccagaaccgcatggtg
gtggtttcggctgccaaccgcgtcatgactgacttcacagtgttcgaacgtatctcttta
gcctggagctccaccacttcgctcatgtgggcctgcggcaggcacctgtacgagtgtgcc
gagggggtgggaggggagggtacagtagagaaggacatagccactaagatgaggcagagg
gcacagtccaggtacggtcatgatacggtccaggtgtggaagaaccatttgctggccgga
ggggacgacccccagctcaagtccttgtggtacactctgttcttcatgaagcagtacact
gaagacgtggagcagaaacagcaggggagcaaacaggccctggtctattcaggcatcaag
aacatagtcaagtccagctcaggcactacagagaaccggcggtgctggagcggctcagac
cgccagacggacgtccccaggttccacagcgaggagcgcagccttgcccttcgtctgtgc
ggctggatcaaccgaggccccgacatcaacgtggagcccttcctgcgctccctggagggg
gagggcgagtgggagcgtgcggccgccgtggccctcttcaacctggacatccgcagggcc
atccagatcctcaacaagggagcctccgctgagcgaggcgacctgaacctaaacgtggtt
gccatggcgttgtcaggctacacggacgagaagagttccctgtggagggagatgtgcagc
tctctgaggctgcagctcaagaacccctacctgtgtgtcatgtttgccttcctcaccagt
gagcctggcacctacgacggagtactgtatgagagtagtgtggccgtaacggaccgagtg
gccttcgcatgcatgttccttaacgactcacagctgcctcgctacatggagaagttgacc
agtgagatgaaggaggtggggaacctggaggggatcctgctgacggggctgaccaaagac
ggagtggacctgatggagagctacgtggaccggaccggagacgtccagaccgctagcttc
tgcatgctcaagggctccccaggggaggtggtgaaggacccacgtgtccagtgctggatc
gagaactaccgtaacctgctggacgcatggaggttctggcacaaacgggctgagtttgac
atccacaggagcaagctggaccccagctccaaaccactggcacaggtgtttgtgagctgt
aacttctgtgggaagtccatatcgtacagctgttcggccatgccccaccagggccgcggc
ttcagccagtatggggtcagcggatcgcccaccaagtcaaaggtcaccagctgccccggc
tgcaggaagcccctcccccgctgtgccctctgcctcatgaacatgggcacgcctgtgtcc
aactgcccaggtactggacatggcacggggaagtcagatgagaaggtggatctgaccagg
gaaaacaaattggcccagttcaacaactggttcacctggtgccacaactgccgacatggc
ggccacgcaggtcacatactcagctggtttagggaccatacagagtgtccagtgtcggcc
tgcacctgtaagtgcatgcagctggacaccacaggaaacctggtgccttcagacagccac
tag
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