Oncorhynchus tshawytscha (Chinook salmon): 112223045
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Entry
112223045 CDS
T05605
Name
(RefSeq) protein argonaute-1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112223045
03036 Chromosome and associated proteins [BR:
otw03036
]
112223045
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112223045
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112223045
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112223045
microRNA pathway
RISC loading complex
112223045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
112223045
NCBI-ProteinID:
XP_024241751
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All DBs
Position
LG23:8580360..8602610
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AA seq
945 aa
AA seq
DB search
MPPLSGRHPMPPLSGRHPMPPLSGRHPMPMLTFLSSLLHLFHLPYPHPYRFCPCLNFQHP
FPKLPMSTTAPPVPMGPFPPPLQQVFQAPRRPGMGTVGKPIKLLANYFEVEIPKMDVFHY
EVDIKPDKCPRRVNREVVEYMVQHFKPQLFGDRKPVYDGKKNIYTVLALPIGSEKVDFEV
TIPGEGKDRIFKVSIRFLATVSWRLLQETLVSGRLQVPLDSVQALDVAMRHLASMRYTPV
GRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIEFMCEV
LDIRNIDEQPKTLTDSQRVRFTKEIKGGPLNSDRWALPGLKVEVTHCGQMKRKYRVCNVT
RRPASHQTFPLQLESGQTVECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCN
IVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLMKNANFNLDPYIQEFGIKVKDEM
AEVTGRVLPAPILQYGGRLLSPTCSTSQNRAIATPNQGVWDMRGKQFYNGIEIKVWAIAC
FAPQKQCREEVLKNFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGL
QLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGIN
NILVPHQRSAVFQEPVIFLGADVTHPPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPR
QEIIEDLSYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLE
KDYQPGITYIVVQKRHHTRLFCADKSERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAG
IQGTSRPSHYYVLWDDNRFTADELQILTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARY
HLVDKEHDSSGEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgccccctctctctggccgtcacccaatgccccctctctctggccgtcacccaatgccc
cctctctctggccgtcacccaatgcccatgctcactttcctttcctcattactccattta
tttcatctcccatacccacatccctaccgtttctgcccttgcctaaacttccaacaccct
ttccctaaattgcccatgtctaccactgcccctccagtgcccatggggcccttcccccca
cctctgcagcaggtgttccaggcaccccgccggccgggcatgggcactgtgggcaagccc
atcaagctgctggccaactactttgaggtggagatccccaagatggacgtattccactac
gaggtggacatcaagcctgacaagtgtccccgacgggtcaacagggaagtggtggaatac
atggtgcagcacttcaagccccagctctttggcgacaggaagccggtgtacgacggcaag
aagaatatctatacggtgctagcgcttcctattggaagtgagaaggtggactttgaggtg
actatccctggggaggggaaggatcgtatcttcaaggtgtctatccgctttctggccacg
gtgtcatggcgtctgctccaggagacgctggtcagcgggcgcctgcaggtacccctggac
tctgtccaagccctggatgtggccatgcgccacctggcctccatgaggtacactccagtg
ggacgatcattcttctccccacctgaaggatactaccatcctctgggtggggggagggaa
gtgtggtttggtttccaccagtctgtacgccccgccatgtggaagatgatgctaaatatt
gatgtgtctgccacggccttctacaaagcccagccggtgatcgagttcatgtgcgaagtc
ctggacatccgcaacatagacgagcaacccaagaccctgaccgactcgcagagggtccgc
ttcaccaaggagatcaaaggtgggccgttgaacagtgatcggtgggcgttaccaggtctg
aaggtggaggtgactcactgcggtcagatgaagaggaagtaccgcgtctgcaacgtcacg
cgacgccccgccagccaccagacgtttcccctgcagcttgagagcggacagacggtagaa
tgtacggtggcccagtacttcaagcagaagtacaatctgcagctcaagtatccccacctg
ccctgcctccaggttggtcaggagcagaagcacacctacctgcccctggaggtgtgtaac
atagtagcagggcagcgctgtatcaagaaactgacagataatcagacgtccactatgatc
aaagccacggctcgctctgcacctgacagacaggaggagatcagccggctgatgaaaaat
gccaacttcaacctggacccgtacatccaggagtttgggatcaaggtgaaggatgagatg
gcggaggtgacgggaagggtgctgcctgcccccatcctacagtatggaggacggcttttg
tctcccacctgttccacctcacagaaccgggccattgccacgcccaaccagggggtgtgg
gacatgaggggaaagcagttctacaacggcattgagatcaaggtttgggccattgcctgc
ttcgccccccagaaacagtgtcgggaggaggtgctcaagaacttcacagaccagctgcgt
aagatctccaaggatgctgggatgcccatccagggccagccgtgtttctgtaaatacgcc
cagggagccgacagtgtggagcccatgttcaggcacctgaagaacacctactctggattg
cagctcatcattgtcatcctgcctggaaagacccccgtctacgcggaggtgaagagggtg
ggagatactctcctaggaatggccactcagtgtgtccaggtgaagaacgtggtgaagacg
tccccccagaccctctccaacctctgcctcaagatcaatgtcaagctggggggaatcaac
aatatcctggtgccccaccaacggtcagcagtgttccaggagcctgtcatcttcctgggg
gccgatgtaacacacccccctgctggagatgggaagaagccctccattactgctgtggtc
ggcagtatggacgcccaccccagcaggtactgtgccacagtccgggtccagaggcccagg
caagagattatcgaagacctttcttacatggtccgagagctgctgatccagttctacaag
tcgacccgcttcaagcccaccaggatcatcttctacagggacggagtgcctgaggggcaa
ctgccgcagatactccactacgagcttctggccatcagggatgcgtgcatcaagctggag
aaggactaccagcctggtatcacctacatcgtggtccagaagcgccaccacacacgcctc
ttctgtgccgacaaatctgagagaatcgggaagagtggtaacattcctgcagggaccaca
gtggacaccagcatcactcacccatttgagtttgacttctacctttgcagtcacgcgggt
atacaggggactagtcggccctcacattactacgtcctgtgggacgacaatcgtttcacc
gccgacgagctgcaaatcctcacttaccagctgtgccacacctacgtgcgctgtacccgc
tccgtctctatccccgcgccagcctactatgcccgcctcgtggccttccgtgcccgctac
catctggtggacaaggagcatgacagtagtggggaggggagccatgtctctggtcagagt
aacggtcgggacccccaggctctggccaaggcggtgcagattcaccacgacacgctgagg
accatgtacttcgcctga
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