Oncorhynchus tshawytscha (Chinook salmon): 112223175
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Entry
112223175 CDS
T05605
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04060
Cytokine-cytokine receptor interaction
otw04068
FoxO signaling pathway
otw04110
Cell cycle
otw04218
Cellular senescence
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112223175
04350 TGF-beta signaling pathway
112223175
04068 FoxO signaling pathway
112223175
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112223175
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112223175
04218 Cellular senescence
112223175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112223175
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112223175
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112223175
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Growth factors/receptors
112223175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Beta-prop_RIG_2nd
CBM96
Motif
Other DBs
NCBI-GeneID:
112223175
NCBI-ProteinID:
XP_024241972
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Position
LG23:1408665..1434825
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AA seq
411 aa
AA seq
DB search
MNYCVLSLLLTLDLATVAVSLSTCSTLDMDQFMKKRIEAIRGQILSKLKLTSPPETYPKP
EEVSRDIIAIYNSTRDLLQEKANERAATCERQRSEEEYYAKEVHKIDMQPPYPSENVISP
THYNPYYRRLTFDVTSMEKNASNLVKAELRVFRLQNTKARVSEQRIELYQILSHKDLASP
TQRYIDSKVVRTRMEGEWLSFDVTEAVSEWLLHRDRNSGFKISLHCPCCTFVPSNNYIIP
NKSEELETRFAGIDDSFHHSGDLKVYRKRRHSAQAPHLLMMLLPSYRLESQHKSHRSKRA
LDAAFCSRNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHSKV
LGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcgttttaagtcttctcctgaccttggatttagccactgtggccgtcagt
ttgtctacatgcagtacgctggacatggatcagtttatgaaaaagcgcatagaagccatc
cggggacagatactgagcaagctgaagctcacgagccccccggagacataccccaaaccc
gaggaggtgtcgcgggatatcatcgccatctataacagcacgagggacctgttgcaggag
aaagccaacgaacgggcagcaacgtgtgagcgccaacgaagcgaggaggagtactatgca
aaagaggttcacaaaatcgacatgcaacccccctacccctctgagaatgtcatctctccc
acgcactacaacccgtactacagacggctcaccttcgacgtgacctccatggagaagaat
gcctctaacctggtcaaggctgagctacgcgtcttccgcctccagaacaccaaggcccgc
gtgtctgaacagaggattgagctgtaccagattttaagtcacaaggacctggcttccccg
acgcagcgctacatcgacagcaaggtggtgcgcacgcgcatggagggggagtggctgtct
tttgatgtgacagaggcagtcagtgaatggttgcttcacagagacagaaacagtggattc
aagatcagcttgcactgtccgtgctgcacgtttgttccctcaaacaactacatcatcccc
aataagagtgaggagctggaaacccgctttgcaggtatagatgacagcttccaccacagc
ggagacctgaaggtgtataggaaacggcgccacagcgcccaggctccacacctgctcatg
atgctgctgccctcctaccgcctggagtcccagcacaagagccaccgctccaaacgagcc
ctggacgctgccttctgctccagaaatgtccaggataactgctgcttgcggtcgctctac
atcgacttcaagaaggatctgggctggcggtggatccacgagcccaagggttacaacgct
aacttctgcgccggggcctgtccctatctatggagcgctgacacccagcattccaaggtg
ctaggtctgtacaacaccatcaacccggaggcgtcagcatcgccctgctgtgtgtctcag
gatctggaacctctcaccatcctctactacatcggcaagacccccaagatagagcagctc
tccaacatgatcgtcaagtcctgcaagtgcagctag
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